Bosea vaviloviae: BHK69_26075
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Entry
BHK69_26075 CDS
T04483
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bvv
Bosea vaviloviae
Pathway
bvv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bvv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BHK69_26075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvv03021
]
BHK69_26075
Transcription machinery [BR:
bvv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BHK69_26075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AOO83446
UniProt:
A0A1D7U7V4
LinkDB
All DBs
Position
complement(5659783..5661810)
Genome browser
AA seq
675 aa
AA seq
DB search
MATKASEREKTDQVAPEAPPTSDGPLLDLTDQAVRRMIKLAKKRGYVTYDELNEVLPSEE
FSSEQIEDVLGQLSEQGINVVDNEDPEASGEERAAARTGTNGDEEESEGELVETQRSALP
VEVKRNLEPTERTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPLTF
QAIIIWRDELVEGKVLLRDIIDLEATYAGPDGKNPSQLPGEGEEGEPAEAAAPAGEVPEG
ELPSDMDDDDIENNVSLSAMEAELKPRVLETFDSIADNYKKLRRLQDQDIANRLENTKLS
PSQDRKYKKLKDDIITAVKSLSLNNNRIEALVEQLYDINKRLISHETRLLRLAESYGVGR
EDFLKQHVGGELDPKWVLRVSKLGSRGWREFVGAELDRIKQLREEIHTLASETGLEIQEF
RKIVLMVQKGEREARQAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREP
TPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQS
NLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKL
KHPSRSRKLRSFLDN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaagcgagcgaacgggaaaagaccgaccaggtcgcgccggaagcccccccg
acgtccgatggaccgttgctcgatctgaccgatcaggccgtaaggcggatgatcaagctc
gctaagaagcgcggctatgtcacctatgacgaactgaacgaagtcctgccctcggaggag
ttctcctccgagcagatcgaggatgtgctcggccagctcagcgagcagggcatcaacgtt
gtcgacaatgaagaccccgaagcctcgggcgaggagcgcgcggctgcgcgcaccggcacg
aatggcgacgaggaggagagcgagggcgagctcgtcgagacgcagcgctcggcgttgccc
gtcgaggtcaagcgcaatctcgagccgaccgagcgcaccgacgatccggtgcggatgtat
ctgcgcgagatgggctcggtcgaattgctctcccgcgagggcgaaatcgccatcgccaag
cgcatcgaggccggccgcgaggcgatgatcgcggggctctgcgagagtccgctgaccttc
caggccatcatcatctggcgcgacgagcttgtcgaaggcaaggtgctgctgcgcgacatc
atcgatctggaagcgacctatgccggccccgacggcaagaatccgtcgcaactgcccggc
gaaggcgaggagggcgagcccgctgaggccgctgcgcctgccggcgaggtgccggaaggc
gaattgccgtccgacatggacgatgacgacatcgagaacaacgtctcgctctcggccatg
gaagccgagctcaagccgcgcgtgctcgagaccttcgattcgatcgccgacaactacaag
aagctgcgccgcctgcaggaccaggatatcgccaaccggctggagaacaccaagctctcg
ccatcgcaggaccgcaaatacaagaagctgaaagacgacatcatcactgcggtgaagtcg
ctctcgctcaacaacaaccgcatcgaggcgctggtcgagcagctctacgacatcaacaag
cggctcatctcgcacgagacgcgcctgctacggctcgccgagagctatggcgtcggccgc
gaggacttcctcaagcagcatgtcggcggcgagctcgacccgaaatgggttctgcgcgtc
tccaagctgggctcgcgcggctggcgcgaattcgtcggtgccgagctcgaccggatcaag
cagctgcgcgaggagatccatacgctggcctccgagaccggcctggagatccaagagttc
cgcaagatcgtgctgatggtccagaagggcgagcgcgaggcccggcaggcgaagaaggag
atgatcgaggccaatctgcgcctcgtgatctcgatcgccaagaagtacacgaaccgcggc
ctgcaattcctggatctgatccaggaaggcaatatcggcctgatgaaggcggtcgacaag
ttcgagtaccgccgcggctacaagttctcaacctacgcgacatggtggatccgccaggcg
atcacgcgttcgatcgccgaccaggcccgcaccatccgcatcccggtgcatatgatcgag
acgatcaacaagatcgtccggacctcgcgccagatgctgcacgagatcggccgcgagccg
accccggaggagctggccgagaagctcgccatgccgctggagaaggtgcgcaaggtcctc
aagatcgccaaggagccgatctcgctcgaaaccccgatcggcgacgaggaagacagccat
ctcggcgacttcatcgaggacaagaacgcgatcctgccgatcgacgcggcgatccagagc
aatctgcgcgagacgacgacgcgggtgctggcttcgctgacgccgcgcgaggagcgcgtg
ctgcgcatgcgcttcggcatcggcatgaacaccgaccacacgctggaagaggtcggccag
cagttcagcgtcacgcgcgaacgtatccgccagatcgaggcgaaggcgctcaggaagctg
aagcatccgagccggagccggaagctcaggagcttcctggacaattga
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