Borrelia venezuelensis: bvRMA01_000638
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Entry
bvRMA01_000638 CDS
T08848
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bvw
Borrelia venezuelensis
Pathway
bvw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
bvRMA01_000638 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvw03400
]
bvRMA01_000638 (recB)
Enzymes [BR:
bvw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
bvRMA01_000638 (recB)
DNA repair and recombination proteins [BR:
bvw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
bvRMA01_000638 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_22
DEAD
PDDEXK_1
AAA_30
STPPase_N
Motif
Other DBs
NCBI-ProteinID:
UPA12286
LinkDB
All DBs
Position
complement(669873..673316)
Genome browser
AA seq
1147 aa
AA seq
DB search
MKEIIDKIKYNEKILIEASAGTGKTYILENTITNLLINKTYSPSEILVLTFTKKATEEMH
IRILKSIENAYQNSQTDKSLKKIYEQSNKIFISTINKFALHSLNNFQIETEHFVRYSVKE
NFTSEIDEIVYEFLRKADSLKRELTIKDDEFEIFKSKFKTTKDMIQYIRQGYKRDKTQEL
GDWIKTQTIFKKMLTNQDRLIHEYNSIVEALNKMTMEEKRTFLNKHNQGIKISEIKYSNE
KDIVKITDILANNKFFSKIIESNLKKNVTLLPKELKIQTALRELSHKTNTNKEDKNTLRR
FINLKIEYKILKYIEKELANIINATNTIDQKHIMLNFKKHLESSDNKLLNSIKSRYKIIL
IDEAQDLNLIQIEIFKLLNSCGIKLIFIADPKQIIYTFRNADISYYNQGIKDQIKDNAKI
TLLTNYRSNKKLVEPLNIMFDNIYNKTHTAKIEQIEFTKSKTESKNDENKIFINDQEIEA
INIIETESEDENILQKTAITIKYLLTNGKIYDNNKLRQIKESDIKVLCRTSKEIDLIDKE
LKNQNIKTNKIEESFFKTKEFSEIFYLIKCFDRKQNFQTLNYILTSKIINLPWELYLSLL
EKNEIKHIEAAISDIIYLLENQEITLINAIDKIISKKELWLNLAKIFNNTTFTEFAQSKK
SYRETLINEKKFEELKNYEISLDFISKIYYEDKTIESLICTLEDLILNKDTEQDEEQITT
QGDQSIEILTIHKSKGLSINIVFLIGDIQHNDNLMKKSDTFYKFCLENRIEYDFLKLKEN
QQSAKHKILNEEKNIFYVGTTRSRFALFIINKGTIINKMLELAKIKTIDKINLDFNVYNL
IKTHKFNKLEKNDNKEIKLIPPTPINKHLFRREYTHSYTSLASSYKSTYHANQETRDDET
YDNDANCTEETLPKGKDIGNILHVIMKDINFSDAKDDFNNFQKINIALIQKRIEHFNSKL
NTPKIQEMLIKMIYNILNTKIRFIDARLCDIQELQKEMEFLIKINTKIYKQKSLFKNYNK
LDLTFNEGYIKGIIDLIFKINNKVYILDYKTNYLGANLKDYNLTNLKKKMKQEKYDLQYK
IYALGTKKILFKNPEEYNKYFGGVIYLFTRAFQKNIKEQSKTQNGIYFTIPNFKELDLEQ
IYLQLKY
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaataatagataaaatcaaatacaacgaaaaaatattaattgaggcttcagca
ggaactggaaagacctacatacttgagaatactattacaaacttactcataaataaaaca
tactctccaagcgagattctagtgctaacattcacaaaaaaagcaacagaagagatgcat
attagaatattgaaatcaattgaaaatgcatatcaaaattcacaaacagataaatcttta
aaaaaaatttacgaacaatcaaataaaatatttatctcaaccataaacaaatttgcacta
cattctctaaacaactttcaaatcgaaacagaacactttgtcagatacagtgtaaaagaa
aattttacatcagaaatagacgaaatagtttatgaatttttaagaaaagcggattcatta
aaaagagaattaacaatcaaagatgatgaatttgaaatctttaagtctaaatttaaaact
acaaaagacatgattcaatatataagacaagggtataaaagagacaagacacaagaactt
ggagattggataaaaactcaaacgatttttaaaaaaatgcttacaaatcaagatagatta
attcatgagtataactcaatagtcgaagcattaaacaaaatgactatggaagaaaaaaga
actttcctaaataaacataatcaaggaattaaaatatcagaaataaaatatagtaatgaa
aaagatatagtaaaaataacagacatacttgcaaacaacaaatttttttcgaagataata
gaatccaatcttaaaaaaaatgtcactcttttacctaaggaactaaaaatacaaaccgct
ttaagagaacttagccataaaacaaatacaaataaagaagataaaaacacactaagaaga
tttattaacctaaaaatcgaatataaaatacttaaatatatagaaaaagaacttgcaaat
atcattaatgcaacaaacacaatagaccaaaaacatataatgctaaacttcaaaaaacac
ctggaatctagtgataacaaactattaaattcaataaaaagcagatataaaataatacta
atagatgaagcacaagatttaaacctaatacaaatagaaatatttaaactacttaattct
tgtggcataaaactaatatttatagccgatcctaagcaaataatttatacatttagaaat
gctgatatatcatattataaccaaggtataaaagatcaaataaaagataacgcaaaaata
accttactaacaaattacagatcaaataaaaaattagttgaacctttaaatattatgttt
gataatatctataataaaacacacacagctaaaatcgaacaaatagaatttaccaagtca
aaaacagagtctaagaatgacgaaaataaaatttttataaatgatcaagaaatagaagca
ataaacataatagaaactgaaagtgaagatgaaaatattttacaaaaaacagctataaca
ataaaatatctactaacaaacggaaaaatttatgataacaataaacttagacaaattaaa
gaatcagacataaaagtactttgcagaacaagtaaggaaatagatttaatagataaggaa
cttaaaaatcaaaatataaaaacgaataagatcgaagaatcattctttaagacgaaagaa
tttagcgaaatattttaccttataaaatgtttcgacagaaaacaaaattttcaaactcta
aactatatcttaactagcaaaataataaaccttccgtgggagttatacctaagtctactt
gaaaaaaatgaaataaaacacatagaagcagccattagtgacataatatatttacttgaa
aatcaagaaataacattaataaacgcaatagataaaatcatatcaaagaaagagttatgg
ctcaatttggcaaaaatttttaataatactacatttactgaatttgcacaatcaaaaaaa
agctacagagaaaccctaataaacgagaaaaaatttgaggaacttaagaattacgaaata
agtctagactttatttccaaaatttactatgaagataaaaccatagaatcattaatatgc
actctagaagatctaatactcaacaaagatactgaacaagatgaagagcaaatcactacc
caaggtgatcaatccatagaaatactgacaattcataaatcaaaaggactaagtattaat
atcgtatttctcataggtgatattcaacacaatgataacttaatgaaaaaatcagataca
ttttataaattttgcttagaaaataggatagaatatgattttttaaaattaaaagaaaat
caacaatctgccaaacataagattttaaatgaagagaaaaatattttttatgtaggaaca
acacgatcaagattcgcactatttattatcaataaaggcacaataataaataaaatgtta
gagctagcaaaaataaaaacaatcgataaaataaatttagactttaatgtatacaatctg
attaaaacccataaattcaataaattagaaaaaaatgataacaaagaaataaaattaatc
cctccaacaccaataaacaaacatttatttagaagagaatatacacatagctatacaagt
cttgcatcaagctataaatcaacttaccatgcaaatcaagaaacaagagatgatgagact
tatgacaatgatgctaattgtactgaagaaacactcccaaagggtaaagatattggtaat
attttacatgtcataatgaaagatataaattttagcgacgcaaaagatgattttaacaat
tttcaaaaaatcaatattgctcttatacaaaaaagaatcgaacatttcaattcaaagcta
aatacacccaagatacaagaaatgctaataaaaatgatttataacatattaaatacaaaa
atcagatttattgacgcaagactgtgtgatattcaagaattacaaaaagaaatggaattt
ttaatcaagataaatacaaaaatttataaacaaaagtctctctttaaaaattacaacaag
ttggatttaacatttaatgaaggatatataaagggaatcattgatcttatatttaagata
aataataaagtatacattttagactataaaacaaattatcttggagcaaatttaaaagat
tataatttaacgaacttaaaaaagaaaatgaaacaagaaaagtatgacttacaatataaa
atttacgcactaggaacaaaaaaaatactctttaaaaatccagaagaatataataaatat
tttggaggagtaatatatctctttacaagagcatttcaaaaaaatattaaagaacaatct
aaaacacagaatgggatttatttcaccataccaaatttcaaagaattagatttagaacaa
atatatttgcaattaaaatattaa
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