Borrelia venezuelensis: bvRMA01_000780
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Entry
bvRMA01_000780 CDS
T08848
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
bvw
Borrelia venezuelensis
Brite
KEGG Orthology (KO) [BR:
bvw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvw03021
]
bvRMA01_000780
Transcription machinery [BR:
bvw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
bvRMA01_000780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_10
GerE
DnaD_N
Phage_terminase
HTH_28
KORA
HTH_23
HTH_25
Sigma70_r4_2
HTH_11
V-SNARE_C
Formin_GBD_N
ENT
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UPA12411
LinkDB
All DBs
Position
complement(821204..822007)
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AA seq
267 aa
AA seq
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MNIFSNEDLNIYLKSVREHRLITHEEEIELAKQIKLGDLKAKNKMINANLRLVLKIIKRY
AGKGLKVEDLIQEGNLGLIRAAEKYDPSKNTKFSTYASFWIKQSLQRALNTKTRLVKVPY
RKENLILQINKYLMEEEKSPKKEDIMERFNLTTAQYIKIIPYLEKEYSLDKKIEGSENST
LLNLYEDNSFNPESTLEQNSTLKHLNHILETKLNEKERYIIIKRYNLDNSDKKSTLKDIS
NELGISSETVRQIEKRVLKKLKEELYQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatatttagcaatgaagatttaaacatatacttaaaatccgtaagagaacacaga
ctgataactcacgaagaagaaattgaacttgcaaaacaaattaaactaggagacctgaaa
gccaaaaacaaaatgataaatgccaatttacgtctcgtcttaaaaataattaaaagatat
gctggcaaaggattaaaagttgaagacttaatacaagaaggaaatctaggtttaattaga
gcagctgaaaaatatgatccaagtaagaacaccaaattctcaacttacgcctcattttgg
attaaacaatcgcttcaaagagcattaaataccaaaaccagacttgtaaaggtaccatac
agaaaagaaaatttaatactccaaataaataaatatctcatggaagaagaaaaatcacca
aaaaaagaagacataatggaaagatttaacttaacaactgctcaatatataaaaatcatt
ccctatcttgaaaaagaatattcccttgataaaaagatcgaaggttcagaaaattctacg
ctactaaacctctatgaagacaattcttttaatcctgagagtacccttgaacaaaattca
acattaaaacatctcaatcacatactagagaccaaactaaatgaaaaggaaagatacatc
ataataaaaagatataacttagacaacagtgataaaaaaagcaccttaaaagacatttcc
aatgaacttggaatctcctcagaaaccgttagacaaattgaaaaaagagtactaaaaaaa
ctcaaagaagaactttatcaataa
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