Candidatus Blochmannia vicinus (nom. nud.): M9408_01260
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Entry
M9408_01260 CDS
T08509
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvx
Candidatus Blochmannia vicinus (nom. nud.)
Pathway
bvx03420
Nucleotide excision repair
bvx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M9408_01260
03430 Mismatch repair
M9408_01260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvx03400
]
M9408_01260
Enzymes [BR:
bvx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9408_01260
DNA repair and recombination proteins [BR:
bvx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9408_01260
MMR (mismatch excision repair)
Other MMR factors
M9408_01260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
URJ33219
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Position
complement(304172..306121)
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AA seq
649 aa
AA seq
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MNISNILSKLNDKQKEAVTSNDKNILVLSGAGSGKTRVLVNRIAWLQLVKKCTPWSIMAV
TFTNKSALVMRNRVQSLIGVQKKSDIWISTFHGLANHLLRTHYINANLPKDFQILDKNDQ
IRLLKQLIRSLNLNEKKYSVHQAMHYVNTEKNKISDIQNTNINNNSIKTTWIRLYQSYRD
ICHRSGLIDFNELLERAYLLCLNYPNILHYYQKRFTNILVDEFQDTNKIQYDWLCLLSRE
SNNLMIVGDDDQSIYGWRGAQVKNFQRFLEDFKNVRIITLEQNYRSTNNILKAANALICK
NHTRLKKKLWTRENKGDAISVYCAFNSADEALFVANNLINWKKKHGSLNECAILYRNNFQ
SRLLEEILSKKNVPHQIYGGIKFFERKEIKDIMAYLKFIINQNNNIAYMRIINTPNRGIG
PRTLESINKYANLNHLSLWDSSLFISNKKIIKGKSAIALKKFITLIDSLKKQILTILPLH
EQIYHIIRQVGLWNTYKEKTSIPTYHEHIHNIQELIIMSKQYDNSLESTIHESPLQQFLS
YISLEFEENLSNSHTDSVQLMTLHAAKGLEFSQVFIVGLEEGICPSYVALTNKELLEEER
RLIYVGITRAMHKLTISYSETRHVYGKETIIQSPSRFINELPIDCLEVS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttctaatattcttagcaaactaaatgataaacaaaaagaagcagtcacttct
aatgacaaaaatatattggtattgtctggagccggaagcggaaaaactcgggtattagtg
aatcgtattgcttggctgcaactagtaaaaaaatgcacaccatggtcaataatggcggta
acttttacaaacaaatctgctttagttatgcgtaatcgtgttcaatctttaattggtgtt
caaaaaaaaagtgatatatggattagtacttttcatggattagcaaatcatttgttacgc
actcattatataaatgcaaatttaccaaaagattttcaaatccttgacaagaatgatcaa
attcgacttttaaaacaattaatacgttctcttaatttaaatgaaaaaaaatacagcgtg
catcaggctatgcattatgtcaatacagaaaaaaataaaatttcagacattcaaaatact
aatataaataataattcaataaaaacgacatggatacgactttatcaatcttatcgtgat
atatgtcaccgttctgggttaatagattttaatgaattattagaacgcgcatatttgcta
tgtttaaattatccaaatattttgcattattatcaaaaacgatttactaatattttagta
gatgaatttcaagatactaataaaatacaatatgattggttatgcctgttgtcaagggaa
agtaataatttaatgattgttggtgatgatgatcaatctatttatggttggagaggggca
caagtaaaaaattttcaaagatttttagaagattttaaaaatgtacgaattattacatta
gaacaaaattatcgttctactaataatattttgaaagctgccaacgctcttatttgtaaa
aatcacacacgtctaaaaaaaaaattatggacacgcgaaaacaaaggggatgcaatttct
gtttattgtgcttttaactcagcagatgaagctttatttgtagcaaacaatttaataaat
tggaaaaaaaaacatggttcactcaatgaatgcgctattttatatcgcaataattttcaa
tctcgtttattggaagaaattctatcaaaaaaaaatgtgcctcatcaaatatatggagga
ataaaattttttgaacgtaaagaaattaaagatatcatggcttatttaaaatttattatt
aatcaaaataataatattgcttatatgcgaataattaatacacctaatagaggaattggg
ccacgtactttagaaagtataaataaatacgctaatttaaatcatttaagtctatgggac
agtagcttatttatttcaaacaaaaagattattaaaggaaaatctgctattgctctaaaa
aaatttattacattaatagattcattaaaaaaacaaattttaactatattgcccttacac
gaacaaatttatcatattattagacaagtcggattatggaacacatataaagaaaaaacg
tcgataccaacgtatcatgaacatatacacaatattcaagagctaattataatgagcaaa
caatatgacaattcattagaatcaacaatacatgagtctccattacaacaatttttgtca
tatatttctttagaattcgaagaaaatttatctaattcacatacagattcagttcaatta
atgacactacatgctgcaaaaggattagaattttcccaggtatttattgtaggactagaa
gaaggaatttgcccaagttatgttgctttgactaataaagagctattagaagaagagcgt
agattaatttatgtcggcatcacacgcgctatgcataaattaacaattagttattcagaa
acccgtcatgtctatggaaaagaaacaataattcaatcaccgtctagatttattaacgaa
ttaccaatagattgtttagaagtgtcttaa
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