Candidatus Blochmannia vicinus (nom. nud.): M9408_02120
Help
Entry
M9408_02120 CDS
T08509
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bvx
Candidatus Blochmannia vicinus (nom. nud.)
Pathway
bvx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9408_02120 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvx03019
]
M9408_02120 (pnp)
03016 Transfer RNA biogenesis [BR:
bvx03016
]
M9408_02120 (pnp)
Enzymes [BR:
bvx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M9408_02120 (pnp)
Messenger RNA biogenesis [BR:
bvx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M9408_02120 (pnp)
Transfer RNA biogenesis [BR:
bvx03016
]
Prokaryotic type
tRNA degradation factors
M9408_02120 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH_2
S1_2
OB_RRP5_4th
S1_RRP5
TECR_N
Ribosomal_L6
Motif
Other DBs
NCBI-ProteinID:
URJ32803
UniProt:
A0ABY4SX29
LinkDB
All DBs
Position
502272..504371
Genome browser
AA seq
699 aa
AA seq
DB search
MLNPIVHKFKYGKHTVILDVGTVARQANAAVMVSMSDTTVLVTVVSSNQVKLEQDFFPLV
VNYQERTYAAGKFPGGFFRREGRPSENETLTSRLIDRPIRPLFPKGFINDVQVVATVMSV
NPQVDPDIVAIIGVSAALSLSDIPFLGPIGAARVGYIKNKYVLNPTTTELSNSKLDLVIS
GTESNILMVDSESCLLSEKEILDAIIFGHEQQQTVIYNINKLVQKFGKSKCSWKEKEINM
SLKTYVSELYESRSKDIYCFFDKQERHAKVDSIKKDIIKTVLNNNCDSNIVVDEKEIMYL
LNYLETQSIRYRILENKLRVDGRSKDVIREIDIKTGILPRTHGSALFTRGDTQALVTVTL
GTERDAQNIDGLIGARIDRFLLHYNFPPYCVGEIGIMGAPKRREIGHGRLAKRGMLAVMP
DSNEFPYTIRVVSEITESNGSSSMASICGTSLALMDAGVPIKESVAGVAMGLIKEGNDFV
VLSDIISDEDHIGDMDFKISGSRQGITALQMDIKIDGITYDIINIALEKAKYARFQILDI
MDKIIKVPKKEISKFAPRIYSIKVNPGKIKDIIGKGGSVIRSLTEETNTIIDVEDDGTIR
IVSLDYDKAKQAIRRINDITANVEIGAIYTGKVTHIVEFGAFVTILSGKEGLVHISQISE
KRINKVTDYLKLGQEVLVKVLEIDRQGRIRLSMKGIKAV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatccgattgttcataaatttaaatatgggaaacatactgtaattttagacgtt
ggaactgtagctcgtcaggcaaatgctgcggtcatggtgagtatgagtgatactacagta
cttgttactgtagttagttctaatcaagtaaaattagaacaagatttttttcctcttgtt
gtaaattatcaagaacgcacgtatgccgccggaaaatttccaggaggtttctttcgtaga
gaaggtcgcccaagtgaaaatgaaacgttaacgtctcgtttgattgatcgccctattcga
ccattatttcccaaagggtttattaacgatgtgcaagtagttgctacagtgatgtcagta
aatccgcaagtggacccagatatcgtagccataataggagtttctgctgcattaagttta
tctgatattccatttttggggccaattggagcggctagagttggttatattaaaaataaa
tacgtactaaacccaacaacgacagagttatctaatagtaaattagatttggttatttca
ggtactgaatctaacattttgatggtggattcagaatcatgtttactaagtgaaaaagaa
atattagatgctattatatttggacacgaacaacaacaaacagtgatttacaatatcaat
aaattagtccaaaaatttggaaaatctaaatgttcttggaaagaaaaagaaattaacatg
tccttaaaaacatatgtatctgaattgtatgagtctcgctctaaagacatatattgtttt
tttgataaacaggagcgtcatgctaaagttgatagtattaaaaaagacatcataaagact
gttcttaataataactgtgatagtaatatcgttgtagatgaaaaagaaataatgtatctt
ttaaattatttagaaacgcaatcaattcgttatcgtattctagaaaataaattacgtgtg
gatggacgttcaaaagatgtaattcgtgaaatagatataaaaacaggtatactgcctcgt
actcatggatcagcattgtttactagaggcgacactcaggcattagtaaccgtcacactt
ggtacagaacgtgatgcacagaatattgatggattaatcggagcacgtattgatagattc
ttattacattataattttccgccatattgtgttggagagatcggtattatgggcgctcca
aaaagaagagagattggccatggacgattagcaaagcgtggaatgttggcagttatgcct
gattctaatgaatttccttatacaatacgtgtagtgtcagaaattactgaatccaatggg
tcatcttccatggcatccatctgtggaacatctttggcgttaatggatgccggggtaccg
attaaagaatcagttgctggcgttgctatgggattaattaaagaaggcaacgattttgtg
gtattatccgacattataagtgatgaagatcatattggagacatggattttaaaatatct
ggtagtcgtcagggcattacggcattgcaaatggatattaaaatagatggaattacttat
gatattataaacattgcgttagaaaaagcaaaatatgctagatttcaaatactagatatt
atggataagattattaaggttcctaagaaggaaatttcaaaatttgcaccaagaatatac
agcatcaaagttaatccgggtaaaattaaagatattataggaaaaggaggatctgtcatt
cgttcattgactgaagaaactaatactattattgatgttgaagatgatggtaccataaga
atagtgtctttagattatgataaggcaaaacaagctattcgcagaattaacgatattact
gcaaatgttgaaataggagctatttatactggaaaagttacacatattgttgaatttggc
gcattcgtaactattttatctggaaaagaaggattagtgcatatttctcagatttctgaa
aaaagaataaataaagtcactgattatttaaaattaggacaagaagtattagtaaaagta
ttagaaatagatcgtcaagggagaattcgtttaagtatgaagggaataaaagcagtgtaa
DBGET
integrated database retrieval system
