Candidatus Blochmannia vicinus (nom. nud.): M9408_02945
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Entry
M9408_02945 CDS
T08509
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bvx
Candidatus Blochmannia vicinus (nom. nud.)
Pathway
bvx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M9408_02945 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvx03400
]
M9408_02945 (recD)
Enzymes [BR:
bvx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M9408_02945 (recD)
DNA repair and recombination proteins [BR:
bvx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M9408_02945 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
SH3_13
nSTAND3
AAA_22
ResIII
DEAD
UvrD_C
FtsK_SpoIIIE
AAA_29
Pif1_2B_dom
AAA
Mg_chelatase
AAA_16
NTPase_1
RuvB_N
AAA_28
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
URJ32945
LinkDB
All DBs
Position
complement(685605..687497)
Genome browser
AA seq
630 aa
AA seq
DB search
MKDITKKALKLGLWNTLDVQFANVLTLPISDNNNKYNVKEALILASATLSAHVRFGHVCL
PLCLITFDKLFQGNHPELVYAIYKKLGKLSIDAWQELLLSCPAVSDGSKITPLVLENKRL
YLYHMWEDECRVARFFNYKCQSNILQKEKIISVLNQLFPIIYTEIDWHKIATAIGITHQR
VLISGGPGTGKTSIIAKIIAALLLCSNRNDDLKIKMIAPTGKAAALLTESFKININNIPQ
LDKTYLHNLPERATTLHSLLETRFYNKNIQYDYLDPMHLDLLVIDEASMVSLSMFAQLFL
TISPQTRVIFFGDQYQLYPVEPGSVFKDICQFSSFQYSYKRYQEIVNLTGYEFPIVSYSK
LSTHYNYNSIIDGMCILKKNYRFNERSGINQLAVAINLGDCTRVLSLLTSNIYKDLHYIY
IVEKESYMNMILNCAMEYSNYLQKLQYTKISKTNILESFNHYRILCALRDGPFGVIRINY
FIEQILSEKGLIKLNNSGNYIGRPIIILRNKPSLGLCNGDIGVLLLNDQNKLSAYFILPE
DRLKVVRLYQLPEHETCFAMTIHKSQGSEFNHIAIILPNKHTPILTRELLYTAVTRSRQC
LFLYATDHVIIRSINLVTKRYSGLYDRIEK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatattactaaaaaagctttaaaattagggttatggaatacattagatgtgcaa
tttgccaatgtgttaactctgcctatttctgataataataataaatataatgtaaaagaa
gcgttaatattggctagtgcgacattaagtgctcatgttagatttggccatgtttgttta
cctttgtgtttaattacttttgataaattatttcaaggtaatcatcctgaattagtttat
gcaatatacaaaaaattaggaaaattatcgatagatgcttggcaagaattattactttct
tgtcctgcagttagtgatgggtcgaaaattaccccattagtattagaaaataagcgtttg
tatttatatcacatgtgggaagatgagtgcagagttgcgcggttttttaattataaatgt
cagtcaaatattcttcaaaaagaaaaaataatttctgtgttaaatcaattatttcctata
atttatacagaaatcgattggcacaaaattgctactgctattggaataacacatcaaaga
gtgttaatttctggaggtcctggtactggaaaaacatcgattatagctaaaataatagcg
gcactattgctatgtagtaatcgtaatgacgacctaaaaataaaaatgattgccccaacg
ggaaaagcggcagcccttctaactgaatcttttaaaataaatataaataatatcccacaa
ttagataaaacttatttacataatttaccggaaagagctaccactttacatagtttacta
gaaacacgattctataataaaaatattcaatatgactatttagatcctatgcacttagat
cttttggttattgatgaagcttctatggttagtttatctatgtttgctcagttatttttg
acaatttcacctcaaacaagagttattttttttggtgatcaatatcaattatatccagta
gagcctggatctgtatttaaagatatatgtcaattttctagttttcaatactcttataaa
cgttatcaagaaattgtaaatcttacaggttacgaattccctattgtatcttattctaag
ctatccacacattataattacaacagtattattgatggtatgtgtatactgaagaaaaat
tatcgatttaatgaaagatcaggaattaatcaattggctgttgctataaatttaggagat
tgtacccgcgttttatcgttattgacttcaaacatatataaagatttgcattatatttat
attgtagaaaaagaaagttatatgaatatgattcttaattgcgcaatggaatattctaat
tatttacaaaaattgcaatatactaagatatctaaaacaaatattttagaatcttttaat
cattatcgaatattatgtgcattacgtgatggtccatttggtgtgataagaattaattat
ttcattgagcaaattttaagtgagaaaggattaattaaattaaataattctggtaattat
ataggtagacccatcattatattacgtaataaaccatctttaggattatgtaatggagat
atcggagtgttgttactaaacgatcaaaataaattgtctgcatattttattctaccagaa
gatagattaaaggttgtgcggttatatcaattaccggaacatgaaacttgttttgctatg
actatacacaagtcacaaggatctgagtttaaccatattgcaataatattacccaataag
cacacgccaatattaacacgagaattactatatactgctgttactagatctcgtcaatgt
ctttttttatatgcaacagatcatgtaattatacgtagcatcaatcttgtcacgaaacgt
tatagtggtttgtatgatagaatagaaaaatga
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