Brevundimonas vancanneytii: NCTC9239_00516
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Entry
NCTC9239_00516 CDS
T06708
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bvy
Brevundimonas vancanneytii
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvy03032
]
NCTC9239_00516 (ihfB)
03036 Chromosome and associated proteins [BR:
bvy03036
]
NCTC9239_00516 (ihfB)
03400 DNA repair and recombination proteins [BR:
bvy03400
]
NCTC9239_00516 (ihfB)
DNA replication proteins [BR:
bvy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC9239_00516 (ihfB)
Chromosome and associated proteins [BR:
bvy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCTC9239_00516 (ihfB)
DNA repair and recombination proteins [BR:
bvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCTC9239_00516 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
VTO11851
UniProt:
A0A4P1JW48
LinkDB
All DBs
Position
1:514894..515184
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AA seq
96 aa
AA seq
DB search
MIKSELIEKLAAENLHLTHAEVERVVNVILGRMTETLSDGGRVELRGFGAFSVRSRPART
GRNPRTGETVEVPAKAVPFFKSGKELRERLNASGDA
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtctgaactgatcgagaaactggcggctgagaacctgcatctcacccatgct
gaggtggagcgggtcgtgaacgtgatcctgggccgtatgacagagaccctgtcggacggc
ggacgggtcgagcttcgcggtttcggcgccttctcggtgcgtagccgcccggcgcggacg
gggcgcaatccccgcaccggcgagacggtcgaagtcccggccaaggccgtgccctttttc
aagagcggcaaggaactgcgcgagcgtctcaacgcttccggcgacgcctga
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