Brevundimonas vancanneytii: NCTC9239_01307
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Entry
NCTC9239_01307 CDS
T06708
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvy
Brevundimonas vancanneytii
Pathway
bvy03420
Nucleotide excision repair
bvy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC9239_01307 (pcrA)
03430 Mismatch repair
NCTC9239_01307 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvy03400
]
NCTC9239_01307 (pcrA)
Enzymes [BR:
bvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC9239_01307 (pcrA)
DNA repair and recombination proteins [BR:
bvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC9239_01307 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC9239_01307 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
DUF3553
PcrA_UvrD_tudor
AAA_11
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
VTO14181
UniProt:
A0A4P1K2Z8
LinkDB
All DBs
Position
1:complement(1286150..1288486)
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AA seq
778 aa
AA seq
DB search
MTDLPAPRISDLARAQAPQGAAADYLSGLNPEQREAVETTEGPVLVLAGAGTGKTRVLTT
RLAHILATGRAKPWELLVVTFTNKAAREMLERIGHLIGPSSEGLRWLGTFHSVAAQILRR
HAELVGLKSSFTILDTDDQERLLKQLLEAANIDTKRFTPKSLAHMIDHWKNRGWTPDKLP
PGEDFANGKGPALYAAYQARLATLNACDFGDLLLHNITILSKHADLAEEYRRRFRYILVD
EYQDTNVAQYLWLRLLTSSTGNVCCVGDDDQSIYGWRGAEVDNILRFERDFPGAKVIRLE
RNYRSTKHILGAASALIAANQDRLGKTLWTEDDSGDKVRVRGVWDGEAEARLIADEIETA
RKQGMNYKDMAVLVRASFQMRAFEERFLMLAIPYVVIGGPRFFERAEIRDAHAYLRLIQS
EDDDLAFERIVNVPKRGIGDTSVQKILHIARENGVSAMRAVRHLITTDELQARTRTPLAN
FVRDLDRWRDLMAMGTPHWQVTETLLDESGYTAMQKADRTSGQTRLDNLKELTQSMQSFE
TLQAYLEHVSLVMDLERRDENADGSGSVQIMTLHGAKGLEFPLVFLPGWEEGVFPSQRSI
DEKGVKGLEEERRLAYVGVTRAKQDARISFAANRMVYGRWTSQLPSRFVDELPIAHVEPQ
SDTGYYGASTGMKEAKSRWDDAPSFGGSYSSPGWKRAQTYTAAQTPKPAYARRAVIEGEG
RLIATADPKAASGWSRGDRVFHQKFGYGQVRAVEGNKLVVSFDKAGEKKVIDTFVEKA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacctgcccgctccccgcatttccgacctcgcccgcgcccaagctccgcaaggc
gcggcggccgactatctgtcgggcctgaaccccgagcagcgcgaggcggtggagacgacc
gaggggccagtgctggtgctggcgggcgccggcacaggcaagacgcgcgtcctgaccacg
cgcctggcgcatatcctggcgacgggccgggccaagccgtgggagctgctggtcgtcacc
ttcaccaacaaggccgcgcgcgagatgctcgagcggatcggccatctgatcggcccgtcg
tccgaggggttgcgctggctgggcaccttccactcggtcgcggcgcagatcctgcgtcgc
catgcggaactggtcgggctgaagtccagcttcaccatcctggatacggacgatcaggaa
cggctgctgaagcagcttctggaagcggccaacatcgacaccaagcgattcacgcccaag
tcgctggcccatatgatcgaccactggaagaaccgcggctggacgcccgacaagctgccg
ccgggcgaggacttcgccaacggcaagggcccggcgctgtacgccgcctatcaggcgcgg
ctggcgacgctgaacgcctgcgacttcggcgacctgttgctgcacaacatcaccatcctg
tcgaaacatgctgatctggcggaggaatatcgccgccggttccgctatatcctggtggac
gaatatcaggacaccaacgtcgcccagtatctgtggctgcggctgctgacctcctcgacc
ggcaatgtctgctgcgtcggcgacgacgatcagtcgatctacggctggcgcggggccgag
gtggacaacatcctgcgcttcgagcgtgacttccccggcgccaaggtcatccggctggag
cgcaactatcgctcgaccaagcacattctgggggcggcctcggccctgatcgcggccaat
caggaccggctgggcaagaccctgtggaccgaggacgacagcggcgacaaggtgcgggtg
cgcggcgtctgggacggcgaggccgaggcccgcctgatcgccgacgaaatcgaaaccgcg
cgcaagcagggcatgaattacaaggacatggctgttcttgttcgcgcgtcatttcagatg
cgggcgtttgaagaacgcttcctgatgctggccattccctatgtcgtcatcggcgggccg
cgcttcttcgagcgggcggagatccgcgacgcccacgcctatctgcggctgatccagtcc
gaggacgacgacctggcgttcgagcgcatcgtcaacgttcccaaacgcggcatcggcgac
accagcgtccagaagatcctgcacatcgcgcgcgagaacggcgtctcggccatgcgggcg
gtgcgccacctgattacgacggacgagcttcaggcgcgcacccgcacgccgctggccaac
ttcgtgcgcgatctggaccgctggcgcgacctgatggccatgggcacgccccactggcag
gtgacggagaccctgctggacgagagcggatacaccgccatgcagaaggccgaccgcacc
agcggccagacgcgcttggacaacctgaaggaactgacccagtcgatgcagtcgttcgag
acgctgcaggcctatcttgagcacgtttcgctggtcatggatctggagcgccgcgacgag
aacgccgacggatccggctcggtgcagatcatgacgctgcacggcgccaaggggctggaa
ttcccgctggtcttcctgccgggctgggaggaaggcgtcttccccagccagcgcagcatc
gacgagaagggcgtgaagggcctcgaggaggaacgccgcctggcctacgtcggcgtcacc
cgcgccaagcaggatgcgcgcatcagcttcgccgccaaccgcatggtctacggccgctgg
acctctcagctgcccagccgcttcgtcgatgaactgcccatcgcccacgtcgagccccag
tcggacaccggctattacggcgcctcgaccgggatgaaggaggccaagagccgctgggac
gacgccccctccttcggcggcagctattccagccccggctggaagcgcgcccagacctat
accgccgcccagactcccaagcccgcctatgcccgccgcgccgtgatcgaaggcgaaggc
cgcctgatcgccaccgccgatcccaaggcggcgtccggctggtcgcgcggcgaccgcgtc
ttccaccagaagttcggctatggtcaggtgcgcgcggtggagggcaacaagctggtggtc
agtttcgacaaggcgggcgagaagaaggtcatcgacaccttcgtggagaaggcgtga
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integrated database retrieval system
