Brevundimonas vancanneytii: NCTC9239_03051
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Entry
NCTC9239_03051 CDS
T06708
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvy
Brevundimonas vancanneytii
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvy03032
]
NCTC9239_03051
03400 DNA repair and recombination proteins [BR:
bvy03400
]
NCTC9239_03051
Enzymes [BR:
bvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC9239_03051
DNA replication proteins [BR:
bvy03032
]
Prokaryotic type
DNA Topoisomerases
NCTC9239_03051
DNA repair and recombination proteins [BR:
bvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC9239_03051
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
VTO19259
UniProt:
A0A4P1KIE4
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All DBs
Position
1:2955089..2956102
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AA seq
337 aa
AA seq
DB search
MLTSAPQPPSSDGLIWSSNETPGLTRRRSGRGFCYRDAKGRLVRDQGILMRIHALAIPPA
WRDVWICPDPNGHIQATGRDARGRKQYRYHAEWTAQAASHKFARLPDFARRLPRLHARVE
NDLSRRGPCKEKVVASAVRLLEITLIRVGNAAYARQNRSFGLTTLRKRHLEVDGSALIFE
FRGKSGKEHCVKVSDRRLARVMRGLEGLPGQHLFKYRDAEGVLKPISSDDVNAYIREAMG
DQFSAKDFRTWAATVSAARAFCEMALPTSQTEARRNVSACMRTIAGLLGNTPTVCRGSYV
HPRVIELYETGSITTLLPGPDAQGFDSSLARLLGGPA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgagtgcgccccagccgccgtcttccgacggactgatctggtccagcaacgag
actccgggcctcacgcgtcgccggagcgggcgaggtttctgctaccgtgacgccaaaggc
cgcctggtccgcgatcagggcatcctcatgcgcatccacgccctggccattccgcctgcg
tggcgggacgtctggatctgtcctgacccgaacggccatatccaggcgacgggacgcgat
gcgcgcggccgcaagcagtatcgctatcacgccgaatggacggctcaggccgcctcgcac
aagttcgcccgcctgcctgatttcgctcgccgcctgccgcggctgcacgcgcgggtggag
aacgatctatcgcgccgggggccctgcaaggagaaggtcgtggcgtcggccgtccgtctg
ctggagatcaccctgatccgcgtcggcaacgccgcctatgcccgccagaaccgcagtttc
ggcctgacgaccttgcgcaaacgccacctggaagtcgacggttcggccctgatcttcgag
ttccggggcaagagcggcaaggaacactgcgtcaaggtcagcgaccggcgtctggcgcgt
gtcatgcgcgggttggaaggcctgcctggccagcacctcttcaaataccgcgacgccgaa
ggcgttctgaagccgatcagttcagacgacgtgaacgcctatatccgcgaggccatgggc
gatcagttctccgccaaggacttccggacctgggcggccaccgtttccgccgcccgcgcc
ttctgcgagatggccctccccacgtcccagaccgaagcccggcgcaacgtctcagcctgc
atgagaacgatcgcgggcctgcttggcaatacgccgacggtctgccggggttcctatgtg
catccgcgcgtgattgaactttatgaaaccggaagcatcacaaccttactgcctggtcca
gacgctcagggtttcgattcgagcctggcgcgattgctgggcggccccgcctag
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