Brevundimonas vancanneytii: NCTC9239_03121
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Entry
NCTC9239_03121 CDS
T06708
Symbol
ligT
Name
(GenBank) 2'-5'-RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bvy
Brevundimonas vancanneytii
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvy03016
]
NCTC9239_03121 (ligT)
Enzymes [BR:
bvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NCTC9239_03121 (ligT)
Transfer RNA biogenesis [BR:
bvy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NCTC9239_03121 (ligT)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
VTO19446
UniProt:
A0A4P1KJ49
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All DBs
Position
1:complement(3033472..3034011)
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AA seq
179 aa
AA seq
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MLRLFTAIPIPEDVAETLARRQSGLPGARWRPLDALHVTLAFYGEASERTADDLASELTR
AEGGGAFEITLNGVGAFGDAHRSHTLWAGLERSERLNVLAGRCRSAGERAGVPPEKREYR
PHVTLAYLKPQANPDRIGAWITGHNLLKSPPIRVDRFGLYSSVLTGDGSVYTLEREYLL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcctgttcaccgccattccgatccccgaggacgtcgccgagaccctggcgcgg
cgtcaatccggcctgcccggcgcgcgctggcggccgctggacgccctgcacgtcaccctg
gccttctatggcgaggcgtccgagcggacggccgacgatctggcctcggaactgacgcgg
gccgagggcggcggggcgttcgagatcaccctgaacggcgtcggcgccttcggcgacgcc
caccgcagccataccctgtgggccgggctggagcggtccgagcggctgaacgtcctggcc
gggcgctgtcggtcggcgggcgagcgggcgggcgttccgcctgagaagcgcgaataccgg
ccgcacgtcaccctggcctatctgaagccccaggcgaaccccgaccgcatcggcgcctgg
atcaccgggcacaatctgctgaagtcgccgccgatccgggtggatcgcttcgggctttac
tccagcgttttgaccggggacggcagcgtctacacccttgaacgcgagtatctgttgtga
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