Brevundimonas vancanneytii: NCTC9239_03155
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Entry
NCTC9239_03155 CDS
T06708
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bvy
Brevundimonas vancanneytii
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvy03016
]
NCTC9239_03155 (truB)
Enzymes [BR:
bvy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC9239_03155 (truB)
Transfer RNA biogenesis [BR:
bvy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC9239_03155 (truB)
Prokaryotic type
NCTC9239_03155 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
VTO19548
UniProt:
A0A4P1KGG2
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All DBs
Position
1:complement(3064279..3065211)
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AA seq
310 aa
AA seq
DB search
MARRKKGDLVNGWVCLDKPYEMGSTEAVTKIRRLFNAQKAGHAGTLDPLASGILPIALGE
ATKTVPFMMEAQKVYRFTIHWGISTDSIDREGEIIARSDVRPSVEAVKAALPSFVGEIDQ
TPPAFSAVRVNGERAYDLARAGVEVELQSRRVTIHEAAVTAAPDADHVEITMRTGKGVYV
RSLARDLAIMLGAEGHVSDLRRERVGPFSIDNAVTLDFLEELAHKGAAFEGLLPVSTALD
DIPELAVTDQDALSLRQGRPIVLLPRQIETLKARLTAGSRLVSVFEGGTLVALGNLRAGR
LEPDRVFNLP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacgcaagaagggcgatctcgtcaacggctgggtgtgcctggacaagccctat
gagatgggttcgaccgaggcggtgacgaagattcgtcgcctgttcaacgcccagaaggcg
ggccatgcggggacgctggacccgctggcctcgggcatactgcccatcgcgctgggcgag
gcgaccaagacggtgcccttcatgatggaggcgcagaaggtctatcgcttcaccatccac
tggggcatttcgaccgacagcatcgaccgcgagggcgagatcatcgctcgttccgacgtg
cgcccctcggtcgaggcggtgaaggccgccctgccgtccttcgtcggcgagatcgaccag
acgccgccggccttctcggccgtacgggtcaatggcgagcgcgcctatgatctggcgcgg
gcgggggttgaggttgaacttcagtcccgtcgcgtgaccattcatgaggcggcggtgacg
gccgcgccggacgccgatcacgtcgagatcacgatgcgcacgggcaagggcgtctatgtc
cgatccctggcgcgcgacctggcgatcatgctgggcgccgagggccatgtctcggacctg
cggcgcgagcgcgtggggccgttctcgatcgacaacgccgtaacgctggattttctggaa
gagttggcgcataagggcgccgcctttgagggcttgctgcccgtttcgaccgctctggac
gacatcccggagttggccgtgacggatcaggacgccctctctctgaggcagggacggccg
atcgttctgctcccccgacagattgaaacgcttaaggcccggctcaccgccggttcgcgg
ctggtttcggtcttcgagggcggaaccctggtcgcgctcggcaatctcagggccggtcgg
cttgaacccgatcgtgttttcaacctcccctga
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