Brevundimonas vancanneytii: NCTC9239_03477
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Entry
NCTC9239_03477 CDS
T06708
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bvy
Brevundimonas vancanneytii
Pathway
bvy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC9239_03477 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvy03400
]
NCTC9239_03477 (mutM)
Enzymes [BR:
bvy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC9239_03477 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC9239_03477 (mutM)
DNA repair and recombination proteins [BR:
bvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC9239_03477 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
VTO20512
UniProt:
A0A4P1KJF2
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All DBs
Position
1:3380722..3381585
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AA seq
287 aa
AA seq
DB search
MPELPEVETVRRGLEPVLEGARLTAPRQNRPDLRFPFPERFIERLEGATVLRLERRAKYL
LFPLSTGETWVTHLGMTGRFTLEGVAPGVFETDAPVIGKHEHMSLTADRGGALTRLGYAD
ARRFGFMGLIPTEAVEGHAWFAKLGPEPLGNAFSGAHLAEAFAGKAQNIKVSLLDQSIVA
GLGNIYVCEALYRARISPLTAAGEISRPRLERLAAEVRNVLGDAIAAGGSTLKDFANVEG
GQGYFQHRFDVYGREHEPCRTEGCRGVVKRIVQGGRSTFFCPLCQKG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcctgaagtcgaaaccgtccgtcgcggcctggagcccgtgctggagggc
gcgcgcctgaccgcaccgcgtcagaaccggccggacctgcgctttcctttccctgagcgc
ttcatcgagcggctggagggggcgacggtgctgcggctggagcggcgcgcgaagtatctg
ctgttccccctgtcgaccggcgagacctgggtgacgcacctgggcatgacgggacggttc
accctggagggcgtcgcccccggcgtgttcgagacggacgcccccgtcatcggcaagcat
gaacatatgagcctgacggccgaccggggcggggcgctgacgcggttgggctacgccgat
gcgcggcgcttcggcttcatgggcctgatcccgaccgaggcggtcgaggggcacgcctgg
ttcgccaagctggggccggagcctctgggcaacgccttctcgggcgcgcatctggccgag
gctttcgcgggcaaggcgcagaacatcaaggtcagcctgctggaccagagcatcgtggcc
ggtctgggcaacatctatgtatgcgaggccctgtaccgggcgcgcatttcgcccctgact
gcggcgggcgagatcagccgcccccggctggagcgtctggcggcggaggtccgcaatgtg
ctgggcgacgccatcgcggcgggcggctcgaccctgaaggacttcgccaacgtcgagggc
ggccagggctatttccagcaccgcttcgacgtctacggccgcgagcatgagccgtgccgc
accgagggctgtcgcggcgtggtgaagcgcatcgtgcagggcggccgctcgaccttcttc
tgcccgctctgtcagaagggatga
DBGET
integrated database retrieval system
