Bradyrhizobium vignae: BRAD3257_0078
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Entry
BRAD3257_0078 CDS
T06968
Name
(GenBank) conserved protein of unknown function
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bvz
Bradyrhizobium vignae
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_0078
Enzymes [BR:
bvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRAD3257_0078
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BRAD3257_0078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
SPP91255
UniProt:
A0A2U3PQ34
LinkDB
All DBs
Position
BRAD3257:77148..80294
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AA seq
1048 aa
AA seq
DB search
MRVFSVPISVPFLRTVVTALLDGRLVEGFEARKEPARLADATLYLPTRRAMRVVREIFLD
EMKADAVMLPRIVALGDIDEDELAFADEDEQFSTAAPLDIPPRLGELERRLTLAQLVAAW
AKGPVLAPLVVGGPASTLALAGDLARLIDDMVTRGVDWSALDALVPDNLDRYWQHSLEFL
RIARIAWPNHLAEINRIEPAARRDLLIAAEARRLTTHPNGPVIAAGSTGSMPATAKFLHA
VAALPHGAVVLPGLDTDLDDDAWRSIGGVRDSLGKFAEHPASNHPQYAMHALLQRLGIKR
SDVEILQPPAEGGRDLLASESMRPSAKTEVWHDRLKQPEVAAKIAGGMRNLAVVEAPNPE
MEALAIAIAMREARHLDKSAALVTPDRALARRVMAALTRWDLAFDDSGGDVLMETSAGVF
ARLAAEAATKGLEPPTLLAMLKHPLCRLGRAPGAWRAAIEGLELAVLRGTRPPPGTAGLL
REFNRFRDELAKLWRSELSALHKAEPRARLRAEDLDRIQALISALQKALAPIESLPTSKP
YDFAELAHRHREIMIELSRDELGIPLAFEEREGLALASVLDDLLRGGTTSGLMVPLPDYP
DVFQTAFGDRAVRRRDRPGARLQIYGPLESRLMQADRIIIGGLIEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGGDEVILTHSAKAGGAPAVASRFLHRLEAVAGDE
LWKAAVRAGEKYVQFAGALDQPDEVRPIKQPEPRPPRATRPLKMSVTAIEDWLRDPYTIY
AKYILRLDALDPVDMPLSAADRGSAIHEAIGEFTETYATRLPDDPARVLRAIGEKHFAPL
MERPEARALWWPRFQRIARWFGEWETARRDAIEAIVAETHGEISIMLDHQRNFRLSARAD
RIERRQGGSYAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFPDIDAGSSVSQLVY
VRLSGNNPPGEERILELKYKQGDEPQPPDAAAAEARAKLEALIRAFEDENQPYTSLNLPM
WANRYGTYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttcccatctcagttccgttcctgcgcacggtcgtcaccgccctg
ctcgacggccggctggtcgaggggttcgaggcgcgcaaggaaccggcgcggctggccgac
gccacgctctatctgccgacgaggcgcgccatgcgcgtcgtgcgcgagatcttcctcgac
gagatgaaggcagatgccgtgatgctgccgcgcatcgtcgcgctcggcgacatcgatgag
gacgagctcgctttcgccgacgaggacgagcagttctcgaccgccgccccgctcgacatt
ccaccgcggctcggcgagctggagcggcggctgacgctggcgcagctcgtcgcggcctgg
gccaagggcccggtgctggcgccgctggtggtcggcggccccgcctcgacgctggcactt
gccggcgacctcgcgcgcctgatcgatgacatggtgacgcgcggcgtcgactggagcgcg
ctcgacgctctggtgcctgacaacctcgatcgctattggcagcactcgctcgaattcctg
cgcatcgcgcgcatcgcctggcccaatcatctcgccgagatcaaccgcatcgagcccgcg
gcgcggcgcgatctcctgatcgctgcggaagcgaggcgcttgaccacgcatccgaacggg
ccggtgatcgcggccggctcgaccggctcgatgccggccaccgcaaagttcctgcacgcg
gtcgccgcgctgccgcatggtgcggtggtgctgccgggcctcgacaccgatctcgacgac
gacgcctggcgcagcatcggcggcgtgcgcgattcgctcggcaagttcgccgagcatccg
gcctcgaaccatccgcaatatgccatgcacgccctgctgcagcgcttgggcatcaagcgc
agcgatgtcgagattcttcagccgccggcggaaggcggccgcgacctgctcgcgtcggag
tcgatgcggccgtcggccaagacggaagtctggcacgaccggctgaagcagcccgaagtc
gccgcaaagatcgcgggcggcatgagaaatctcgcagtcgtcgaggctcccaatcccgag
atggaagccctcgcgatcgcgattgcgatgcgtgaggcgcggcatctcgacaaatccgcg
gcgctggtgacgccggatcgcgctttggcgcggcgggtgatggcggcgctgacgcgatgg
gatctcgccttcgacgattccggcggcgacgtcttgatggaaacctcggccggcgttttt
gcgcgccttgccgcagaggccgcgaccaagggcctggagccgccgacattgctcgcgatg
ctgaagcatccgctgtgccggctcggccgtgcgcccggcgcgtggagagcggcgatcgaa
ggcctggagctggcggtgctgcgcggcacgcgcccaccgccgggcacagccggcctcttg
cgcgagttcaaccgctttcgcgacgagctggcaaagctgtggcgcagcgagctctccgcg
ctccacaaggccgagccccgagcacgtctcagggccgaggatctcgatcgcatccaggcg
ctgatcagtgctttgcagaaggcactggcgccgatcgagagccttccgacgtcgaagcca
tatgatttcgccgagctcgcgcaccggcatcgcgagatcatgatcgagctgtcgcgcgac
gagctgggcattccgctcgccttcgaggagcgcgaaggcctcgcgctcgccagcgtcctc
gacgatctcctgcgcggcggcacgaccagcggattgatggtgccgctgcctgactatcca
gacgtgttccagaccgccttcggtgaccgcgcggtacgtcgtcgcgacaggccgggcgca
cgcttgcagatctacggcccgctggaatcgcgcctgatgcaggccgaccgcatcatcatc
ggcggcctgatcgaaggcgtctggccgccggcgccgcgcatcgatccctggctcagccgg
ccgatgcggcacgagctcgggctcgatctgccggagcgccgcatcggcctttccgcacat
gacttcgcgcagctgctcggcggcgacgaggtgatcctcacccattcggcgaaggccggc
ggcgcgccggcggtggcctcgcgcttcctgcatcgattggaagcggttgccggcgacgag
ctctggaaggcggccgttcgcgccggcgagaaatacgtgcagttcgcaggcgcgctggac
cagcccgacgaagtcaggccgatcaagcagcccgagccgcgcccgccgcgcgcgacgcgg
ccgctgaaaatgtccgtgaccgcgatcgaggactggctgcgcgatccctacacgatctac
gccaaatacattttgcggctcgatgcgctcgaccccgtcgacatgccgctgtcggccgcc
gaccgcggctcggcgatccacgaggcaatcggcgaattcacggaaacctatgctacgcgc
ctgcccgacgatcccgcgcgcgtgctgcgcgcgattggcgagaagcattttgcgccgctg
atggagcggcccgaggcccgcgcgttgtggtggccgcgctttcagcgcatcgcgcgctgg
ttcggcgaatgggagacggcacggcgcgatgcaatcgaggcgatcgtcgcggagacccat
ggcgagatctcgatcatgcttgatcatcagcgcaacttccgtctctccgcgcgcgccgac
cgcatcgagcggcgccagggcggcagctacgccatcctcgactacaagaccggccagccg
ccgaccggcaagcaggtccgcatgggcctgtcgccgcagctcacgctggaagccgcgatc
ctgcgcgagggcggttttcccgatatcgatgccggctcctccgtgagccagctcgtctat
gtccggctcagcggcaacaatccgccgggcgaggagcgtatcctagagctcaagtataag
cagggcgacgagccgcagccgccggatgccgcagccgcggaggcgcgcgccaagctggaa
gcgctgatccgggccttcgaggacgagaaccagccctacacctcgctgaacctgccgatg
tgggcgaaccgctacggcacttatgacgacctcgcccggatcaaggaatggtccgcggcc
ggcggcctgggaatcgaggaatggtga
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