Bradyrhizobium vignae: BRAD3257_0079
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Entry
BRAD3257_0079 CDS
T06968
Name
(GenBank) conserved protein of unknown function
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bvz
Bradyrhizobium vignae
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_0079
Enzymes [BR:
bvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRAD3257_0079
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BRAD3257_0079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SPP91256
UniProt:
A0A2U3PQ31
LinkDB
All DBs
Position
BRAD3257:80288..83764
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AA seq
1158 aa
AA seq
DB search
MVKLPRPIPDEVRARQARASDPTASAFVSANAGSGKTHVLVQRVIRLLLSGVPPEKILCI
TFTKAAAANMAERVFTTLGHWVTLDDHALKKAIVAVGIPHPSAKLCREARKLFACALETP
GGLKVQTIHALCTRLLQQFPFEANVPARFAVLDERDQTDMMERANLKVLLDAARDPDSVT
GCALLTAMASAADVTFKEVVREACLSRDHFMAWTDEAGNAEAAAAQMAAVLGVDVSDRIE
DVETDILDGPFLPRSRWDEIAFALEDGSKSDNDQAGRLREAKVFSGSAQVDAYLCVFLTD
DKLPRKAVLTKKFCDQNPSVARLFEAEAQRLGGLIEKRRAVTIRDRTAALLQIATAAAAN
YRREKQERGLLDYDDLIDKTLAMLDRVASGWVHYKLDRGVDHVLIDEAQDTSPRQWDIVA
HIISEFTAGEGAREGLSRTIFAVGDEKQSIFSFQGAAPHEFDARRRELHRKFTAAGLKFD
PVAFTYSFRSGATILHSVDHVFRDPAIYKSIHSVEIGHPLHNALADAGPSVIELWDLAEA
DDRQDIEGWRAPFDGVAVTSPEVKLARRIQAEIKRLVESGTLTGHEGERRPLRYGDMLIL
VRRRGNAFDAVIQALKHAGIPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALAVALK
SPLFGLDDDDLFQLAWDRKGSLRRALGEHAGTSGKFAAALRRLEACEIRAREETPFAFYA
WLLGGDGGRARILRRLGHEANDALDEFLELALNYERKAPASLQGFMAWLRSADTEVKRDM
EISRDEVRVMTVHGAKGLEASVVFMVDTTSSPADSQRLRLIQVPRGNGGEVVVWAGRKAD
DPKPVAEARKTMIEETEDEYRRLLYVAMTRAADRLIVGGCMPGNMKTVRKLSWYDLIGTG
LAGSGLDKQVIETPLGKVTRFARPEDVAALGTPATSVQQTIALPDWLRTPAPRETIDDDP
VRPSGQSAEEGRSVRSGESIQSRALALQRGTLVHRLLQSLPDIAIERRREAALGFMARNA
SDWPEADRTALADKVLTLIADPRFGPVFAAGSRAEVAIAGRLERPGRTPALVSGQIDRLV
VGPDEVLIVDFKTNQAAPKSAAEAPAAYVRQLALYRAVLTRLYPQKPIRAVLLWTEVLEY
MEISAPALDAALASIISV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgccacgtcccatccccgacgaggtgcgcgcgcggcaggcgcgtgcgtcc
gatccgaccgcgtcggccttcgtgtcggccaatgccggctcgggcaagacccacgtgctg
gtgcagcgcgtgatccgcctgctgctgtcgggcgtgccgccggagaagattctctgcatc
accttcaccaaggccgccgccgccaacatggctgagcgcgtgttcaccacgctcgggcac
tgggtgacgctggatgatcatgcgctcaagaaggcgattgtcgctgtcggcatcccgcac
cccagcgcgaagctgtgccgcgaagcgcgaaaactgttcgcctgtgcgctggagacgccg
ggcgggctgaaggtgcagaccatccacgcgctgtgcacgcgcctgctccagcagttcccg
ttcgaggccaacgtgccggcgcgctttgccgtgctcgatgagcgcgaccagaccgacatg
atggagcgcgccaatctgaaggtgctgctggacgccgcgcgagatcctgacagcgtcacc
ggctgcgcgctgctgacggcgatggcgagcgccgccgatgtcaccttcaaggaggtcgtg
cgcgaggcgtgtctcagccgtgatcatttcatggcctggaccgacgaggccggcaacgcg
gaagccgccgcggcgcagatggctgcggtgctgggcgttgacgtcagcgaccgcatcgag
gacgtcgagaccgacattctggatggcccgttcctgccgcgctcgcgctgggacgagatc
gcattcgcgctggaggatggcagcaaatccgacaatgaccaggctggccggctccgcgag
gcgaaggtgttttccggcagcgcccaggtcgacgcctatctctgcgtcttcctcaccgac
gacaagctgccgcgcaaggcggtgctgaccaagaagttttgcgaccagaatccgtccgtc
gcccgcctgttcgaggccgaggcgcagcggctcggtgggttgatcgaaaagcgtcgcgcc
gtgacgattcgcgaccgcaccgcggccctgctgcagatcgcgaccgccgctgccgcgaac
taccggcgcgagaagcaggagcgcgggctgctcgattatgatgatctgatcgacaagacg
ctcgcgatgctggatcgcgtcgcctcaggctgggtgcattacaagctcgaccgcggcgtc
gatcacgtgctgatcgacgaggcgcaagataccagccctcggcaatgggacatcgtcgcg
cacatcatctccgaattcaccgccggcgaaggcgcgcgcgaagggctgagccgcaccatc
ttcgccgtcggcgacgagaagcaatcgatcttctcgttccagggcgcggctccgcacgag
ttcgacgcacgccggcgcgagttgcaccgcaagttcaccgcggccgggctgaagttcgat
ccggtcgccttcacctattcgttccgttcgggcgcgacgatcctgcattctgtcgatcac
gtcttccgtgaccccgcgatctacaagagcattcattcggtcgagatcggccatcccctg
cacaacgcgctcgccgatgccggtccgagcgtgatcgagttgtgggatctcgctgaagcc
gacgacaggcaagacatcgaaggctggcgcgcgccgttcgacggcgtcgccgtcaccagc
cccgaggtcaagcttgcgcgccgcatccaggccgagatcaagcggctggtcgagagcggc
acgctgacggggcacgagggtgaacgtcgccccctgcgttatggagacatgctgatcctg
gtgcgccggcgcggcaacgcgttcgacgccgtgatccaggcgctgaagcacgccggcatt
ccggtcgccggcgccgaccggctcaagctcaccgagcacatcgccattatcgatctgatg
aaccttgcggatgcgctgctgctgccgcaggacgatctcgcgctggcggtggcgctgaag
agtccgctattcgggctcgatgacgacgatttgttccagcttgcctgggaccgcaaggga
tccttgcgccgcgcgctcggcgagcatgcaggcacaagcggtaagttcgccgccgcgctg
cggcgccttgaagcctgcgagattcgtgcgcgcgaggagacgccgttcgccttctacgcc
tggctgttagggggcgacgggggccgtgcccgcatcctgcgccggctaggccatgaagcc
aatgacgcgctcgacgaattcctggagctggcgctgaactacgagcgcaaggcgccggcc
tcgctgcagggcttcatggcctggctgcgctcggccgacaccgaggtgaagcgcgatatg
gagatctcgcgcgacgaggtgcgcgtgatgaccgtgcacggggccaagggcctagaggcg
tccgtcgtgttcatggtcgacaccacgtcgtcgccggcggactcgcagcggctgcggctg
atccaggtgccgcgcggcaacggcggcgaggtcgtggtctgggccggccgcaaggcagac
gatcccaagcctgtcgccgaggcgcgcaaaaccatgatcgaggagacagaggacgagtac
cgccgcctgctctatgtcgcgatgacacgcgcggcggaccggctgatcgtcggcggctgc
atgcccggcaacatgaagacggtgcgcaagctgagctggtacgacctcatcggcaccggg
ctcgccggctcaggcctcgacaagcaggtgatcgagacgccgctcggcaaggtcacccgc
ttcgctcggccggaggatgtcgcggctctgggcacgcccgcgacgtcggtgcagcagacc
atcgcgttgccggactggctgcgaacaccggctccgcgcgagaccatcgacgacgatccc
gtgcgaccatcgggccagtcagccgaagagggccgcagcgtacgatcaggcgaatcaatc
cagtcgcgcgcgctggcgctgcagcgcggcacgctggtgcaccgtctgctgcaatccctg
cccgacatcgccattgagcgccggcgcgaggccgcgctcggtttcatggcgcgcaacgcc
tcggactggccggaggccgaccgcaccgcactggccgacaaggtgctcaccttgatcgct
gacccgcgtttcggcccggtgtttgccgccggcagccgggcggaggtcgccatcgccggc
cggctggagcggccgggccgcaccccggccctggtgtcggggcagatcgatcggctggtc
gtgggccccgatgaggtcctgatcgtcgatttcaagaccaaccaggcggctcccaagagc
gcggctgaggcgcccgccgcctatgtccgccagcttgcgctttaccgggcggtgctgacg
cggctttatccccaaaagcccatccgcgccgtgctgctctggaccgaggtccttgaatat
atggagatttcggcccccgcgctggacgcggcgctggcatccatcatctcggtgtga
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