Bradyrhizobium vignae: BRAD3257_0388
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Entry
BRAD3257_0388 CDS
T06968
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bvz
Bradyrhizobium vignae
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvz03016
]
BRAD3257_0388
Enzymes [BR:
bvz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BRAD3257_0388
Transfer RNA biogenesis [BR:
bvz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BRAD3257_0388
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
SPP91554
UniProt:
A0A2U3PQY1
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All DBs
Position
BRAD3257:371444..371980
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEIGQSLSNLRGGLPGARWIDPENYHVTLRFIGDIDGASANEIASMLFR
VDRKPFEVKVQGLTSFGGRKPRAVVATIVPSKPLMELQAELERMMQRIGLDPEGRKFIPH
VTLARLHDASDRDVADYLSLRGYFPSKAFMAERFVLFSSRASTGGGPYVVEDAYELCE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgttcacgggtctggaaattccggccgagatcggccagtcgctttccaac
ttgaggggtggcctccccggcgcccgctggatcgatcccgaaaattatcacgtcaccttg
cgcttcatcggcgacatcgatggcgcctccgccaacgagatcgcctcgatgctgtttcgc
gtcgaccgcaagccattcgaggtgaaggtgcagggcctcaccagcttcggcggccgcaag
ccgcgcgcggtggtcgcgaccatcgtgccgagcaagccgctgatggaattgcaggccgag
ctcgaacgcatgatgcagcggatcggcctcgacccggagggacgcaagttcattccgcac
gtcacgctggcccggctgcacgacgcctccgaccgcgacgtcgccgactatctctcgctg
cgcggctacttcccaagcaaggcgttcatggccgaacgcttcgtgctgttctcctcgcgc
gcctctacgggcggcggcccgtatgtggtcgaggacgcctacgaactgtgtgagtag
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