Bradyrhizobium vignae: BRAD3257_2692
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Entry
BRAD3257_2692 CDS
T06968
Symbol
uvrD
Name
(GenBank) putative DNA helicase II homolog
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvz
Bradyrhizobium vignae
Pathway
bvz03420
Nucleotide excision repair
bvz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRAD3257_2692 (uvrD)
03430 Mismatch repair
BRAD3257_2692 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_2692 (uvrD)
Enzymes [BR:
bvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRAD3257_2692 (uvrD)
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRAD3257_2692 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BRAD3257_2692 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
DUF3553
Motif
Other DBs
NCBI-ProteinID:
SPP93760
UniProt:
A0A2U3PX78
LinkDB
All DBs
Position
BRAD3257:complement(2471769..2474336)
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AA seq
855 aa
AA seq
DB search
MIRMTEPSKITGVPDHQPAAGGIAARARASVGPKYLSGLNPEQREAVETLDGPVLVLAGA
GTGKTRVLTTRIAHILSQGRARPSEILSVTFTNKAAREMKHRLGQMLGHAVEGMPWLGTF
HSIGGRILRTHAELAQLKSNFTVLDVDDQVRLLKQLLQAENIDEKRWPARMLAGLIDGWK
NRGLMPSQVPAGEAAMFANGKGGKLYASYQERLKILNAADFGDLLLENIRIFREHPDILR
QYQQRFKFILVDEYQDTNVAQYLWLRLLSQAPAARPSQHAVIPGQAEGPNAESGDESSVR
DSGSAPSAHPGMTVAAAPHTKNICCVGDDDQSIYGWRGAEVDNILRFEHDFPGAKVIRLE
RNYRSTGHILAAASHLIAHNEGRLGKTLRTEDQDGEKVTVTGSWDSEEEARGIGEEIEQL
QRQGEKLNEIAILVRASYQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINS
PADDLAFERIVNTPKRGLGDATVQMLHDHARKRRIPLFEAARAVVETDELKPKARGSLRD
LISQLDRWRAQREVTAHTDLAQIVLDESGYTEMWQKDRSADAAGRLENLKELVRSMEEFE
NLQGFLEHISLVMDREGGAEDDAVSLMTLHSAKGLEFDNVFLPGWEEGLFPSQRTLDEQG
RAGLEEERRLGHVGLTRARRRAKIYFATNRRIHGTWSTTIPSRFLDELPAANVEITESKG
GSAWGGTGGYGASRFDDMEAFGSSYTTPGWQRAQANRNRGGGRGGFEEEAATFSSSSSAG
PDFGSFSSRRRGPLTIEGELVAKSTGTTSEFSLSDRVFHQKFGYGRVTKIDGNKLTIAFD
KAGEKKVVDSFVQRA
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcatgaccgagccgagcaagatcacaggcgtacccgaccaccagcccgcagcc
ggcggcatcgccgcgcgtgcgcgcgcctcggtgggcccgaaatacctttccgggctcaat
ccggagcagcgcgaggcggtggagacgctggacggcccggtcctggtgctggccggcgcc
ggcaccggcaagacgcgcgtcttgaccacgcgcatcgcccatatcctgagccagggccgc
gcccgcccttccgagatcctgtcggtgaccttcaccaacaaggccgcgcgcgagatgaag
caccggctcggccagatgctcggccacgccgtcgagggcatgccgtggctcggcaccttc
cactccatcggcggccgcatcctccgcacccatgccgagctggcgcagctcaagtcgaac
ttcaccgtgctcgatgtcgacgaccaggtccggctgctcaagcagctgctccaggccgag
aacatcgacgaaaaacgctggcccgcgcggatgctggccggcctgatcgacggctggaag
aaccgcggcctgatgccgtcgcaggtgcccgcgggcgaggccgcaatgttcgccaacggc
aaaggcggcaagctctatgcgagctaccaggagcggctgaagattttgaacgcggccgat
ttcggcgatctcctgctggagaacatccgtatcttccgcgagcaccccgacattctcagg
cagtaccagcagcgcttcaaattcatcctggtcgacgagtaccaggacaccaacgtcgcg
caatatttgtggctgcgtctgctgtcgcaggcgccggcggcgcggccttcgcaacatgcc
gtcattccggggcaggccgaaggcccgaacgcggaatctggagatgagtcatcagttcga
gattccgggtctgcgccttcggcgcatcccggaatgacggtggctgccgcgccccacacc
aagaacatctgctgcgtcggtgacgacgaccagtcgatctatggctggcgcggtgccgag
gtcgacaacatcctgcgcttcgagcacgatttccccggcgccaaggtcattcgcctcgag
cgcaattaccgctcgaccggccacatcctcgccgccgcctcgcatctgatcgcgcacaac
gaaggccggctcggcaagacgctgcgcactgaggaccaggacggcgagaaggtcacggtc
acgggctcctgggattcggaagaggaagcgcgcggcattggcgaggagatcgagcagctg
cagcgccagggcgagaagctcaacgagatcgcgatcctggtgcgcgcctcttaccagatg
cgcgagttcgaagaccgtttcgtcacgctcggcctgccctaccgcgtcatcggcggcccc
cgcttctacgagcgcgccgagatccgcgacgcgctggcctatttgcgcgtcatcaattcg
ccggccgacgatctcgccttcgagcgcatcgtcaacacgcccaagcggggcttgggcgat
gccaccgtgcagatgctgcacgaccacgcccgcaagcgccgcatccccttgttcgaggcg
gcgcgcgcggtggtcgagaccgacgagctgaagccgaaggcgcgcggctcgcttcgcgat
ctcatcagccagttagaccgctggcgcgcccagcgcgaggtcaccgcgcataccgacctc
gcccagatcgtgctcgacgagagcggctataccgagatgtggcagaaggaccgttcggcg
gacgccgcgggccggctggagaacctgaaagagctcgtgcgctcgatggaggagttcgag
aacctgcaaggattcctggagcacatctccctggtgatggaccgcgagggcggcgccgag
gacgatgccgtgtcgctgatgacgctgcattcggccaaggggctcgaattcgacaacgtg
ttcctgccgggctgggaggaagggctattcccgagccagcgcacgctggacgaacagggc
cgcgccggcctggaagaagagcgccggctcggccatgtcggtctgacccgggcgcgccgc
cgcgcaaagatctactttgcgaccaaccgccgaatccatggcacctggtcgaccacgatt
ccatcgcgcttcctcgatgaattgcccgcggccaatgtcgagatcacggaatccaagggc
ggctcggcctggggcggcaccggcggctacggcgcctcgcgcttcgacgacatggaggcg
ttcggctccagctacacgacgccgggctggcagcgcgcgcaggccaaccgcaaccgcggc
ggcggacgcggcggcttcgaggaagaagctgcgacgttctcatcctcctcatcggccggc
cccgatttcggcagcttctcctcgcgccgccgcgggcccctgacgatcgagggcgagctg
gtggccaagtcgaccggcaccacctcggaattctcgttgtccgatcgcgtcttccaccag
aaattcggctacggccgtgtcaccaagatcgacggcaacaagctcaccatcgccttcgac
aaggccggcgagaagaaggtcgtggacagctttgtgcaaagggcgtga
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