Bradyrhizobium vignae: BRAD3257_3715
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Entry
BRAD3257_3715 CDS
T06968
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bvz
Bradyrhizobium vignae
Pathway
bvz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRAD3257_3715 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvz03021
]
BRAD3257_3715 (rpoA)
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_3715 (rpoA)
Enzymes [BR:
bvz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRAD3257_3715 (rpoA)
Transcription machinery [BR:
bvz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BRAD3257_3715 (rpoA)
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BRAD3257_3715 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
SPP94729
LinkDB
All DBs
Position
BRAD3257:3435768..3436799
Genome browser
AA seq
343 aa
AA seq
DB search
MGETVTIQKNWQELIRPNKLQVTPGSDPSRFATIVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGVVTA
GDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVSTGKGYVPAERNRPEDAPIGLIPVDSL
YSPVRKVSYKVENTREGQILDYDKLTMTIETNGAITPDDSVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacagtgacgatccagaaaaattggcaagaactgattcggccgaacaagctc
caggtcacgcccggcagcgatccctcgcgtttcgcgaccatcgtcgccgagccgctcgag
cgtggtttcggccaaaccctcggcaacgcgctgcgccgcatcctgctctcctcgctccag
ggcgcggcggtgcagtcggtgcacatcgacggcgtgctgcacgagttctcctcgatcgcg
ggcgtccgtgaggacgtcaccgacatcgtgctcaacatcaaggacatctcgatcaagatg
cagggcgaaggccccaagcgtatggtcgtgaagaagcagggcccgggcgtcgtcaccgcc
ggcgatatccagaccgtcggcgatgtggtcgtgcttaaccccgatctgcagatctgcacc
ctcgacgagggcgccgagatccgcatggagttcacggtctcgaccggcaagggctacgtg
cccgccgagcgcaaccgtcccgaggacgcgccgatcggcctgatcccggtcgacagcctg
tactcgccggtccgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctc
gactacgacaagctgacgatgacgatcgagaccaacggcgcgatcacgccggatgattcc
gtggcctacgccgcgcgcatcctgcaggaccagctcaacgtgttcgtcaacttcgaagag
ccgcgcaaggaagtcgcccaggagatcatcccggacctcgccttcaacccggccttcctc
aagaaggtggacgagctcgagctgtcggtgcgttcggccaactgcctgaagaacgacaac
atcgtctacatcggcgacctcgtgcagaagagcgaggcggaaatgctccgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgag
gatcactactga
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