Bradyrhizobium vignae: BRAD3257_3938
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Entry
BRAD3257_3938 CDS
T06968
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvz
Bradyrhizobium vignae
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvz03032
]
BRAD3257_3938 (topA)
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_3938 (topA)
Enzymes [BR:
bvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BRAD3257_3938 (topA)
DNA replication proteins [BR:
bvz03032
]
Prokaryotic type
DNA Topoisomerases
BRAD3257_3938 (topA)
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRAD3257_3938 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
SPP94949
UniProt:
A0A2U3Q0S6
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All DBs
Position
BRAD3257:complement(3633885..3636647)
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AA seq
920 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNEIAKSLKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKIERVVFNAITKQAV
SDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLIATLLTPRGEAFEARLVGADGKKIQRLDIGTGAEAEDFKKALELA
TYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIAPEAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDLSR
RPDSMSRKLDADQAKLYELIWKRTIASQMESAELERTTVDITAKAGGRTLELRATGQVVK
FDGFLALYQEGRDDEEDEDARRLPAMSQGEAVKRQSLSVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVIAFLESFFSRYVEYDFTAALE
EQLDRISNNEISWQQVLKDFWRDFIGAVDDIKDLRVAQVLDVLDEMLGPHIYPPRADGGD
VRQCPNCGTGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGEAAADRSLGQDPDTGRDVW
LKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPSDVDLELALKLLSLPREIGKHPETG
LPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIAEKAAKGPSRRFGADPGKA
LGDHPSLGTITVKSGRYGPYVTAGGVNATIPSEIEKDAITLPQAIALIDERAAKGGGKTK
ATKAAKPAKAKKAAEKAAEKAANSEDAAPKPKKPAAKKAAAKSKTESTSKARAAVSSTAK
TSPTKATASKAPAKKSAGKN
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaaatatttgggc
tcgtcctatgaggttctggcctcgttcggccatgtccgcgatctcccggcgaagaacggt
tccgtcgaccccgacgccaatttcaagatgatctgggaggtcgaccccaaggcggccggc
cggctcaacgagatcgccaagtcgctgaagggtgctgaccgcctgattctcgccaccgac
cctgatcgcgagggcgaggccatctcctggcacgtgctggaggtgatgaaggaaaagcgc
gcgctgaaggatcagaagatcgagcgggtggtgttcaacgccatcaccaagcaggcggtc
tcggacgcgatgaagcatccgcgccagatcgacggcgcgctggtcgacgcctatatggcg
cgccgcgccctcgactatctggtcggcttcaccctctccccggtgctgtggcgcaagctg
cccggcgcccgctcggccgggcgcgtgcagtcggtggcgctacgcctcgtctgcgaccgc
gagctcgagatcgagaagttcgtgccgcgggaatattggtcgctgatcgcgaccctgctc
acgccgcgcggcgaagccttcgaggcccgcctcgtcggcgccgacggcaagaagatccag
cgcctcgacatcggcaccggcgcggaagccgaggatttcaagaaggcgcttgagctggcg
acctacgccgtcacggcggtcgatgcaaaacccgcccggcgcaatccgcaggcgcccttc
accacctcgacgctgcagcaggaggccagccgcaaatacggttttgcgccggcgcacacc
atgcgcatcgcccagcgcctctatgagggcatcgacatcggcggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgcgcccgaggcgatcacccaggcccgc
aaggtgatcggcgaggattacggcaacgcctatgtgccggatgcgccgcgccagtaccag
gccaaggccaagaacgcccaggaagcgcacgaggcgatccgcccgaccgatctctcgcgc
cgccccgacagcatgagccgcaagctcgatgccgatcaggcgaagctttatgagctgatc
tggaagcgcaccatcgcgagccagatggaatcggccgagctcgagcgcaccacggtggac
atcacggcgaaggccggcggccggacgctggagctgcgcgccaccggccaggtcgtgaag
ttcgacggcttcctcgcgctctaccaggaaggccgcgacgacgaggaggacgaggatgca
cgccgcctgcccgcgatgagccagggcgaggccgtgaaacggcagagcctctccgtcacc
cagcacttcaccgagccgccgccgcgcttctccgaggcttccctggtcaagcgcatggaa
gagctcggcatcggccggccctcgacctatgcctcgatcctccaggtcctgaaggaccgc
ggctacgtgaagctggagaagaagcgcctgcatggcgaggacaagggccgcgtcgtgatc
gcgttcctggagagcttcttcagccgctacgtcgaatacgacttcaccgccgcgctcgaa
gaacagctcgaccgtatctccaacaacgagatctcctggcagcaggtgctgaaggatttc
tggcgcgacttcatcggcgccgtcgacgacatcaaggatctgcgcgtcgcgcaggtgctc
gacgttctcgacgagatgctggggccgcacatctatccgccccgcgccgatggcggcgat
gtcaggcagtgcccgaactgcggcaccggccggctgaacctcaaggccggcaagttcggt
gccttcgtcggctgctcgaactatccggaatgccgctacacccgccagctcgccgccgat
ggcgaggctgccgccgaccgctcgctgggccaggaccccgacaccggtcgggatgtctgg
ctcaaggcgggccggttcggcccctacatccagctcggcgagcagaaggattacgaggaa
ggcgaaaagccgaagcgcgcaggcattccgaagggcacctcgcccagcgatgtcgacctc
gagctcgcgctgaagctgttgtcgctgccgcgcgagatcggcaagcatccggagacgggt
ctgccgatcaccgccgggctcggccgcttcgggccgttcgtgaagcacgacaagacctat
gcgagtctcgaagccggcgacgaggtcttcgacatcggcctcaaccgcgcggtgacgctg
atcgcggaaaaagccgccaagggcccgagccgccgcttcggcgccgatcccggcaaggcg
ctcggtgatcatccctcgctcggcaccataaccgtgaagagcgggcgctatggaccctac
gtcaccgccggtggcgtcaacgcgacgatcccgagcgagatcgagaaggacgcgatcacg
ctgccgcaggcgatcgcgctgatcgacgagcgcgcggccaagggcggcggcaagaccaag
gcaacgaaggcagccaagcctgccaaggccaagaaagctgcggagaaagctgcggagaag
gctgcgaacagcgaggacgccgcgccaaagccgaagaaaccggccgcgaagaaagccgcg
gccaaatcgaaaaccgaatccaccagcaaggcgcgcgccgccgtgtcgtcgacggcaaag
acgtcgccgaccaaggcaaccgccagcaaggctccggccaagaagagtgccggcaagaat
tag
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