Bradyrhizobium vignae: BRAD3257_4182
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Entry
BRAD3257_4182 CDS
T06968
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bvz
Bradyrhizobium vignae
Pathway
bvz03030
DNA replication
bvz03430
Mismatch repair
bvz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRAD3257_4182 (dnaE)
03430 Mismatch repair
BRAD3257_4182 (dnaE)
03440 Homologous recombination
BRAD3257_4182 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvz03032
]
BRAD3257_4182 (dnaE)
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_4182 (dnaE)
Enzymes [BR:
bvz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRAD3257_4182 (dnaE)
DNA replication proteins [BR:
bvz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRAD3257_4182 (dnaE)
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRAD3257_4182 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
DUF6374
Motif
Other DBs
NCBI-ProteinID:
SPP95187
UniProt:
A0A2U3Q1A4
LinkDB
All DBs
Position
BRAD3257:3860442..3863945
Genome browser
AA seq
1167 aa
AA seq
DB search
MPSAGFVHLHVHSAYSLLKGSIKIAKLAELAKKDHQPALALTDTDNLFGALEFSDKMAGS
GIQPIVGCELAIDFGDQDPNARNAIGPSRVVLLAAQERGYRSLMRLNSRAFLESPDSHAP
FIKFDWLEGETEGLIALTGGPDGPISLALAGGLGELAAARCERLAGLFGDRLYIELQRHN
TEKERRVEGGLIDIAYAKGLPLVATNEPYFAATDDYEAHDALLCIAGGRLIAETEREQLT
PDHRFKTRAEMAVLFADIPEALSSTVEIAERCSFRPLTRKPILPFFTVGAASSSDAAAVE
AAELKRQAEEGLAKRLRVHGLSQGTTEETYAKRLAFELDVITRMKYAGYFLIVSDFIKWA
KSQGIPVGPGRGSGAGSLVAWALTITDLDPIKFGLLFERFLNPERVSMPDFDIDFCQDRR
GEVIKYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPAAPV
TLAAAIESEPKLQAFRDEDPIVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVPLY
RDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVACKLLKPRGIHVDLATLPIDDA
ESYQMLARGDVVGVFQVESQGMRRALIDMRPDRFEDIIALVALYRPGPMANIPTYCARKH
GDEEPEYLHPLLEPILKETFGVIIYQEQVMQIAQVMSGYSLGDADLLRRAMGKKIRAEMD
KQRDIFVAGAVKNGVPKGQAETIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHYPVE
FIAASMTLDLNNTDKLSEFRSEAQRLGIKVEPPNINRSGATFEVGENTIYYALAALKGVG
IQAIDQIIAERTRGGLFTSLADFAARVSPRAINKRIIESLAAAGAFDALEPNRARVFAGA
DAILAACQRAHEAATIGQNDMFGMSADAPTIMLPQVEPWLPAEKLRREYDAVGFFLSGHP
LDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDPTG
HFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDAAAAKTQKGLRI
FLRDTKPLDSIAKRLAGPDMAASNGAAPKVGSPGIAPRSNGDGEVSLVMMLDLETEVEMK
LPGRFKVSPQIAGAIKAVAGVVDVQQL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgccggatttgttcaccttcacgttcactcggcctattcgctgctcaagggc
tcgatcaagatcgccaaacttgccgagcttgcgaagaaagaccatcagcccgcgctggcg
ctgaccgataccgacaatctgttcggtgcgctggagttctccgacaagatggcgggctcc
ggcattcagccgatcgtcggctgcgagctggcgatcgatttcggcgatcaggatcccaat
gcgcgcaatgcgatcgggccgtcgcgcgtggtgttgctggcggcgcaggagcgcggctat
cgcagcctgatgcggctgaactcgcgcgcgttcctggaatcaccggacagccatgctccg
ttcatcaaattcgactggctcgagggcgaaaccgaggggctgatcgcactgacgggcgga
ccggacgggccgatctcgttggcgctcgccggtggtcttggcgagctcgccgcggcgcgc
tgcgagcgtctggccggcctgttcggcgaccgcctctacatcgagttgcagcgccacaac
accgaaaaggagcggcgcgtcgaaggcggcttgatcgacatcgcctacgccaaggggctg
ccgctggttgcgaccaacgagccgtatttcgcggcgaccgacgattacgaagcgcatgat
gcgctgctgtgcatcgccggcgggcggctgatcgccgagaccgagcgcgagcagctcacg
ccggatcaccgcttcaagacgcgcgccgagatggcggtgctgttcgccgacattccggag
gcactcagctcgacggtggagatcgccgagcgctgctcgttccgccccctgacgcgcaag
ccgatattgccgttcttcacggtcggcgccgcgtcgagctcggatgcggccgcggtggag
gcggccgaattgaagcgccaggcggaggaggggctcgccaagcgcctgcgggtccacggc
ctgtcgcagggcacgacggaagagacctatgccaagcggctcgccttcgagctcgacgtc
atcacccgcatgaaatacgcgggctacttcctgatcgtgtccgacttcatcaaatgggcg
aagtcgcagggcattccggtcgggccgggccgcggctccggcgccggttcgctggtcgcc
tgggcgctgaccatcaccgacctcgatccgatcaagttcggcctgctgttcgagcgcttc
ctcaatcccgagcgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgc
ggcgaggtgatcaaatacgtccaggagcgctacggccgcgaccaggtcgcgcagatcatc
accttcggtacgctgcaggcgcgcggcgtgctgcgcgacgtcggccgcgtgctgcagatg
ccctacggccaggtcgacaagctgaccaagctggtgccgcagaatccggccgcgccggtg
acgctggctgcggcgatcgagagcgagccgaagctccaggcgttccgcgacgaagacccg
attgtggcgcgcgccttcgacatcgcccagcgcctggaaggcctgacgcgccacgcctcg
acgcatgccgccggcatcgtgattggcgatcgccccttgagcgagctcgtgccgctctac
cgcgatcccaaatccgatatgccggtgacccagttcaacatgaaatgggtcgagccggcg
ggcctggtgaagttcgacttcctcggcctcaagacgctgaccgtgctcgacgtcgcctgc
aagctgctcaagccgcgcggcatccacgtcgatctcgccacgctgccgatcgacgatgcc
gagagctaccagatgctggcgcgcggcgacgtggtcggcgtgttccaggttgaaagtcag
ggcatgcggcgggcgctgatcgacatgcgccccgaccgtttcgaggacatcatcgcgctg
gtcgcgctgtatcgcccgggtccgatggcgaacatcccgacctattgcgcgcgcaagcac
ggcgacgaggagccggaatatctgcaccccctgctggagcccatcctgaaggagaccttc
ggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtgatgtcgggctattcg
ctcggcgacgccgatctgcttcgccgtgccatgggcaagaagatccgcgccgagatggac
aagcagcgcgacatcttcgtcgcgggcgcggtgaagaacggcgtgccgaaggggcaggcc
gagaccatcttcgagctgttggcgaagttcgccgactacggcttcaacaagagccacgcg
gcggcttacgcgctggtgtcctatcacaccgcctatatgaaggcgcattatccggtggag
ttcatcgcagcgtcgatgacgctcgatctcaacaacaccgacaagctctccgaattccgc
tccgaggcgcagcgcctcggcatcaaggtcgagccgccgaacatcaaccgctcgggcgcg
accttcgaggtcggcgagaacacgatctactacgcgctcgccgcgctcaagggcgtcggc
attcaggcgatcgatcagatcatcgcggagcgcaccagaggcggcctgttcacctcgctc
gccgatttcgccgcgcgggtctcgccgcgcgcgatcaacaagcgcatcatcgaaagtctc
gccgccgccggcgccttcgacgcgctggagccgaaccgggcgcgcgtcttcgccggtgcg
gatgcgatcctcgccgcgtgccagcgggcgcatgaagctgcgaccatcggccagaacgac
atgttcggcatgtcggcggacgcgccgaccatcatgctgccgcaggtcgagccgtggttg
ccggccgaaaaactccgccgcgaatacgacgccgtcggcttcttcctgtcgggacacccg
ctcgacgattatgccaccgtgctgaagcggctgcgggtgcagagctgggccgagttctcg
cgagcggtgaagacgggggccaccgccggcaaggtcgccgccaccgtggtctcgcgcatg
gagcggcgcaccaagaccggcaacaagatgggcatcatgggcctgtccgatccgaccggc
catttcgaggccgtgctgttctcggaagggctcgcgcaatatcgcgacgtgctggagccg
ggcgcggccgtgctgctgcagctcggtgccgagcttcagggcgaggacgtccgcgcccgc
gtgctgcatgccgagccgctcgacgccgccgccgccaagacgcagaagggtctgcgcatc
ttcctgcgcgacaccaagccgctggactccatcgccaagcgtctcgccggccccgacatg
gccgcttcgaacggcgccgcgccgaaggtcggcagtcccggcatcgcaccgcgctcgaat
ggcgacggcgaggtctcgctggtgatgatgctcgacctcgagaccgaggtggagatgaag
ctgcccggccgcttcaaggtttcgccgcagatcgccggcgcgatcaaggcggtggcgggc
gtggtggacgtgcagcagctctga
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integrated database retrieval system
