Bradyrhizobium vignae: BRAD3257_6256
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Entry
BRAD3257_6256 CDS
T06968
Name
(GenBank) Topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvz
Bradyrhizobium vignae
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvz03032
]
BRAD3257_6256
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_6256
Enzymes [BR:
bvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BRAD3257_6256
DNA replication proteins [BR:
bvz03032
]
Prokaryotic type
DNA Topoisomerases
BRAD3257_6256
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRAD3257_6256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
SPP97157
LinkDB
All DBs
Position
BRAD3257:complement(5812073..5813176)
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AA seq
367 aa
AA seq
DB search
MLRQTSNEDQILDRTAEVAATIAEEGLRYVSDSTPGYTRKRTGTTFSYYDKDGKRITDAA
VIRRIKSIGIPPAYESVWICPLANGHIQATGLDARGRKQYRYHAKWRELRDQNKYEHIVQ
FAAALPALRDRVAADMRLEGLPREKVLATIVSLLEKTLIRVGNAEYAEKNKSYGLTTMRR
KHVAVGRGVLRFDFTGKSGKQWKLRVEDKRIAAIVKRCAEIPGHELFKYLDDDGQPRTVD
SGDVNAYIKDITGQDFSAKDFRTWAGTVLAALALTEFMKYDSQAEAKRNVVAAIERVSKQ
LGNTPAICRKCYVHPEVLNAYMSGDLVRMIEAKIAQKFKRQYAKLTSDEIMVLAFLRKRL
DSLKDSA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctccgacagaccagcaacgaagaccagatcctggaccgcaccgccgaggtcgcggcg
accattgcggaagaaggccttcgttacgtcagcgactccacgcccggttacacccgcaag
cggacggggactaccttcagttactacgacaaggacggcaagcgcattaccgatgccgcc
gtcatccggcgcatcaagtccatcggtatcccgccggcctatgaatccgtctggatctgc
cctttggcgaatggccacatccaggcgactgggctcgatgctcgggggcgcaagcagtac
cgctaccacgcaaaatggcgtgagctgcgcgaccagaacaagtacgaacacatcgtccag
ttcgcagccgcgctgcccgcgctgcgcgaccgtgtcgcggccgacatgaggctggaaggg
ctacctcgcgagaaggtgctggccacgatcgtcagtcttctggagaagactttgatccgg
gtcggcaatgccgagtatgccgagaaaaacaagtcctacgggctcaccacgatgagacga
aagcacgttgcggtgggccgcggcgtccttcggttcgacttcaccggcaagtcgggcaaa
cagtggaaactccgcgtcgaggacaagcggattgccgccatcgtgaagcgctgcgcggag
ataccaggacatgagctcttcaagtacctggacgacgacgggcagccgcgcactgtggat
tcaggcgatgtcaatgcctacatcaaggacatcacaggccaggacttcagcgcaaaggat
ttccggacttgggccgggacggttctggcggcgttggcgctgaccgagttcatgaagtac
gacagccaggccgaggcgaagcgcaacgtcgtcgccgcgatcgagcgcgtctccaagcag
ctcggcaacacgcccgcaatctgccgcaagtgctacgtgcaccctgaagtcttgaacgcc
tacatgtccggcgacctggtgaggatgatcgaagccaaaatcgcgcagaagttcaagcgg
cagtatgccaagctcacctccgacgagatcatggtactggcatttctccgcaagcgtctc
gattcactaaaggactcagcctag
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