Bradyrhizobium vignae: BRAD3257_8013
Help
Entry
BRAD3257_8013 CDS
T06968
Symbol
nopAF
Name
(GenBank) Type III effector NopAF
KO
K21470
L,D-transpeptidase YcbB
Organism
bvz
Bradyrhizobium vignae
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bvz01002
]
BRAD3257_8013 (nopAF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bvz01011
]
BRAD3257_8013 (nopAF)
Peptidases and inhibitors [BR:
bvz01002
]
Cysteine peptidases
Family C82
BRAD3257_8013 (nopAF)
Peptidoglycan biosynthesis and degradation proteins [BR:
bvz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BRAD3257_8013 (nopAF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
SPP98612
UniProt:
A0A2U3QB16
LinkDB
All DBs
Position
BRAD3257:7284188..7286401
Genome browser
AA seq
737 aa
AA seq
DB search
MRDCLNHRAGFDRVLMTVAATFLTVSASSALAQDQARSSAAELAIEAAIPRPEPANVPPP
TAADIKLDTTATVQDSSKETARESIKADAAPAPDKVETKPSDVATTPAPEAPKSETAKTE
PAKTEPAKTEPAKADTATVTPAAPTAPAAAAAPAAEPVKAASNVPAADQPVADKLKDVIG
AKASRYFDRKNERAAVEKFYGARDFAPVWTQGGALTAAAKGVIARLKDAASDGLNPADYP
VPDFAAATTPDALADAELKLTASMFDYARHAQSGRMHWSQVSADILYPEHPVDPSEVLTK
VTTAADASAALDSYNPPHKLYKALKAKLAELRGQGNGPVIEIAEGPSLKYTPAGKKQAEV
VVEDPRVPQLRAKLGITENASDTRYDAAVADAVRKFQSGAEMKPTGILDDKTVKALNTPK
RDKQIDTVLVNMERWRWLPRDLGAPSLGDAYVILNIPDYTLKVMQHGQQVWTTRVVTGKP
GQHATPLLTETMKYITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLKLEQNRDGSVHI
SQPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAFSHGCMRVQNPDQYASVLLN
ITMPSEKYTPERVRSMYGKSEIDLKFPTPIPVNITYQTAFVDDAGKLQFRKDVYGRDATM
LNILKNNRGKDLEAVVAHSQPSYSRPATTLPSGVAVANNGGGFGSSGPNFFERLFGAPAS
TQPPAPVGRRPQRVFTR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactgtttgaaccaccgtgcgggctttgaccgtgtcttgatgacggtcgcggcg
accttcctcacggtgtcggccagctcggccctggcgcaggatcaggcgcgcagcagcgca
gcagagcttgcgatcgaagctgcgatcccgcgccccgagccggccaacgtcccgcctccg
actgcggccgacatcaagctcgacaccaccgccacagtgcaggactccagcaaggaaact
gcgagggagtcgattaaggcggacgccgcgccggcaccggacaaggtcgagaccaagccg
tccgacgtcgccaccacgcccgcgcccgaagcgccgaagagcgagacggcgaagaccgag
cccgccaagaccgagcctgccaagaccgagcccgccaaggctgacaccgccaccgtcacg
ccggccgctcccacggcacctgctgccgcagcggctcccgccgctgagcccgtgaaggca
gcgagcaacgtgcccgccgccgaccagccggtcgcggacaagctcaaggacgtcatcggc
gccaaggcctcgcgctatttcgaccgcaagaacgagcgcgcggcggtcgagaagttttac
ggcgcccgcgatttcgcgccggtctggacccaaggcggcgccctgaccgccgcggccaag
ggcgtgatcgcgcggctgaaggacgcggcgtccgacggcctcaatcccgccgactatccg
gtgccggatttcgccgccgccaccacccccgatgcgctggcggatgccgagctcaagctc
accgccagcatgttcgactatgcgcgccatgcccagagcggccgcatgcactggtcgcaa
gtcagcgccgacatcctctatcccgagcatccggtcgatccgagcgaggtgctgaccaag
gtcacgaccgcggcggatgcctccgcggcgctcgacagctacaacccgccgcacaagctc
tacaaggcgctgaaggccaagctcgccgagctgcgcggccagggcaatggcccggtgatc
gagatcgccgagggcccttcgctgaaatacaccccggccggcaagaagcaggctgaggtg
gtggtggaagatccgcgcgtgccgcagctccgcgccaagctcggtatcaccgagaacgcc
agcgacacccgctatgacgcagcggtcgcagacgccgtgcgcaaattccagagcggcgcc
gagatgaagccgaccggcattctcgacgacaagacggtcaaggcgctcaacaccccgaag
cgcgataagcagatcgacaccgtgctggtgaacatggagcgctggcgctggctgccgcgc
gatctcggcgcgccttcactgggcgatgcctatgtcatcctcaacattcccgactacacg
ctgaaagtgatgcagcacggccagcaggtctggaccacccgcgtcgtcaccggcaagccg
gggcagcacgccaccccgctgctgaccgagacgatgaagtacatcacggtcaacccgacc
tggaacgtgccgccgtcgatcgtctacaacgaatatctgccggcgcttcagcaggacccg
accgtgctccagcgcatgggcctcaagctcgaacagaaccgcgacggctcggtgcacatc
tcgcagccgccgggtgaagccaacgcgctcggccgcatccgcttcaacttcccgaacaag
ttcctggtctatcagcacgacacgccggacaagaacctgttcgccaaggaagaccgcgcc
ttcagccatggctgcatgcgagtgcagaatccggatcaatacgcgtccgtgctgctcaac
atcaccatgccgagcgagaagtacacgcccgagcgcgtgcgcagcatgtatggcaagagc
gagatcgacctgaaattcccgacgccgatcccggtcaacatcacctatcagaccgcgttc
gtggacgatgccggcaagctgcaattccgcaaggacgtttacggccgcgacgcgaccatg
ctcaacatcctgaagaacaaccgcggcaaggacctcgaggccgtcgtggcccattctcag
ccgagctattcccgcccggcgacgacgctgccatcaggggtcgcggtggccaacaatggc
ggcggcttcggctcgtctggaccaaacttcttcgagcggctgttcggagcgccggcctcg
acccaaccgccagcgccagtcggccgtcgtccgcagcgggtgtttacccgctga
DBGET
integrated database retrieval system
