Bradyrhizobium vignae: BRAD3257_8189
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Entry
BRAD3257_8189 CDS
T06968
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bvz
Bradyrhizobium vignae
Pathway
bvz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRAD3257_8189 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvz03019
]
BRAD3257_8189 (rhlE)
Enzymes [BR:
bvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRAD3257_8189 (rhlE)
Messenger RNA biogenesis [BR:
bvz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRAD3257_8189 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SUa-2TM
Utp25_C
DUF8086
Motif
Other DBs
NCBI-ProteinID:
SPP98782
UniProt:
A0A2U3QBI0
LinkDB
All DBs
Position
BRAD3257:7452829..7454388
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AA seq
519 aa
AA seq
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MERTPLLTSFQDFGLADPISRALQEENYVTPTPIQAQTIPLALTGRDVVGIAQTGTGKTA
SFALPILHRLLENRIKPQPKTARVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVP
MGRQVRALMPGVEVLVATPGRLLDLVHSNGLRLSSVEFLVLDEADRMLDMGFINDIRKIV
AKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSIAERINQRILQVDFSAKPA
FLTKLLQDETINRALVFTRTKHGADKVVKTLAKAGIAANAIHGNKSQNHRERTLAQFRSG
EIRTLVATDIAARGIDVDGISHVINFDLPNVPETYVHRIGRTARAGADGTAISLVAGGEE
LSYLRDIERLIRVALPQEDHRTDAGRRDAGPAPSQQRQGRPGGRPGQRPKGARHGDGRRG
DERHADGRHHSAGKQGDGRHGEGRHAEARHADGRPGSGPNASKGSRRRRSGGKMHSSPVD
RPEQRSAHSAGTPDGIQGVAFLRRESRPNSQPNRKPYSH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaacccctcttttgacttcctttcaggacttcggcctggccgatcccatttcc
cgtgccctccaagaagaaaactacgtcaccccgaccccgatccaggcccagaccatcccg
ctggcgctgaccggccgcgacgtcgtgggtatcgcccagaccggcaccggcaagaccgcg
tctttcgcgctgccgatcctgcatcgcctgctcgagaaccgcatcaagccgcagcccaag
acagcacgcgtcctggtgctgtcgccgacccgcgagctgtccggccagatccttgacagc
ttcaatgcctatggccgccatatccgcctgtcttcgacgctcgccatcggcggcgtgccg
atgggccgccaggtccgcgccctgatgccgggcgtagaggtactggtcgccacccccggc
cgcctgctcgacctcgtgcatagcaacggcttgaggctttcgagcgttgaattcctcgta
ctcgacgaggccgaccgcatgctcgacatgggtttcatcaacgacatccgcaaaatcgtc
gccaagctgccgatcaagcggcagacgctgttcttctcggccaccatgcccaaggatatc
gccgagctcgcggactccatgctgcgggaccccgcccgtgtcgcggtgaccccagtgtct
tcgatcgccgagcggatcaaccagcgtatcctgcaggtggacttctcggccaagcccgcc
ttcctgaccaagctgctgcaagacgaaacgatcaaccgcgctctggtcttcacccgcacc
aagcacggtgccgacaaggtggtgaagacgctggccaaggccggcatcgctgccaacgcc
atccatggcaacaaatcgcagaatcaccgcgagcgcacgctcgcccagttccgctcgggc
gagatccgcaccctggttgccaccgacatcgccgcccgcggcatcgacgtcgacggcatc
agccacgtcatcaatttcgacctgcccaacgtgccggaaacttacgtccaccgcatcggc
cgcaccgcgcgtgccggcgccgacggcaccgcgatctccctggtcgccggcggcgaggaa
ctcagctatctccgcgacatcgagcggctgatccgcgtggccctgccgcaggaggaccat
cgcaccgacgccggccgccgcgatgccggccccgccccgtcgcagcaacgacagggccgg
ccaggcggccgtcccggccagcgcccaaaaggcgcacggcatggcgacgggcggcgtggc
gacgaacggcatgccgatgggcgccaccatagtgccggcaagcaaggcgacggcaggcac
ggtgaaggccggcacgccgaggcaaggcatgctgacggacggcccggcagcggcccgaat
gcgtccaagggttctcgccgccgccggtccggtggtaagatgcactcatcgcctgtcgac
cgtccggaacagcgttccgcgcatagcgccgggacgcctgatgggatacaaggcgttgcc
tttttgcgccgcgagagtcggccaaacagccaaccgaaccgcaaaccctattcgcactag
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