Bradyrhizobium vignae: BRAD3257_8854
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Entry
BRAD3257_8854 CDS
T06968
Name
(GenBank) Metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bvz
Bradyrhizobium vignae
Pathway
bvz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRAD3257_8854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvz03019
]
BRAD3257_8854
Messenger RNA biogenesis [BR:
bvz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BRAD3257_8854
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
SPP99433
UniProt:
A0A2U3QDE9
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All DBs
Position
BRAD3257:8124562..8125824
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AA seq
420 aa
AA seq
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MSKEAGSFRGRVHRGTQQIGGTCIELEAAGERILLDLGLPLDADGASDDLLPSVAGLRGD
DPTLRAIVLSHGHGDHWGLLPLCSPNVPLAMGAATARIMRAAAPFVPNGFVPGVSFELAD
RKTLQIGPFSITPYLVDHSAYDAYALLIHAAGRRLFYSGDIRAHGRKSGLFERLVSDPPR
GVDTMLMEGSSLGRLDERTQFPTEDAIEARLTESLRPPGFVIISASAQNIDRIVSLYRAC
KRSDRTLLLDLYAMEILRATGNERLPSVGWPNLSVYVPEYQRRQIARNRRFDLLEPYKSA
RIYRERITEIADRTVMLFRPAMAPDVETANLWAGARAIWSQWDGYLKDGPGARLKADLAT
RGVPIEIIHTSGHASILDLKRLSSAIRPDKLVPVHTFEGDSFFKYFDNVTRRSDGEWWEV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggaagctggttcgtttcgcggacgtgtccaccgcggaacgcagcaaattggt
ggcacctgcatcgaactcgaggccgcgggcgagagaatcctgctcgaccttggacttccg
ctcgacgccgacggcgcgtccgacgatcttctcccgtccgtggccgggcttcgcggcgac
gatccgaccctgcgtgcgatcgtcctgtcgcacggacacggcgaccattggggtttgctc
cccctgtgcagccccaatgtccccctggccatgggcgctgcaaccgctcgcatcatgcgc
gcggcagctcctttcgtgcccaacggcttcgtgccaggcgtttcattcgagctggccgat
cgcaagactttgcagatcggccccttcagcatcacgccctatctggtcgatcattcggcc
tatgatgcctatgcgctgctgatccacgccgccggccggcgtctgttctatagcggcgac
atccgcgcgcatggtcgcaagagcggcctgttcgagcgattggtgagcgatccgccccgc
ggcgtcgatacgatgctgatggagggatcgagcctcggccgtcttgacgaacggacacaa
tttccgacggaagacgccatcgaagcgagattgaccgagagcctcaggccgccgggcttc
gtcatcatctccgcctcggcgcagaacatcgatcgcatcgtcagcctctatcgcgcctgc
aagcgcagcgaccggacgctgctgctggacctctacgcgatggagatattgcgggccacc
ggcaacgagcgcctgccgagcgtcggctggcccaacctgtcggtctacgtgccggaatat
cagcggcgacagatcgcacggaacaggcgcttcgacctgctcgagccgtacaaatccgcg
cgaatctaccgcgagcgcatcaccgagatcgccgatcgcacagtgatgttgtttcgcccg
gcaatggcccccgacgtggagaccgcaaatctctgggccggcgccagggcgatctggtca
caatgggacggatacctgaaggatggtcctggagccaggctgaaggcggatctcgcaaca
cgcggcgtacccattgagatcatccatacctcgggccacgccagcatcctggatctcaag
cggctctcgagcgcaatacgaccggacaagctggtgcccgttcacacattcgaaggcgac
agctttttcaaatattttgacaacgtcacgcgacgcagcgatggcgaatggtgggaggta
tga
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