Berryella wangjianweii: HLV38_01705
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Entry
HLV38_01705 CDS
T09831
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bwa
Berryella wangjianweii
Brite
KEGG Orthology (KO) [BR:
bwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bwa03009
]
HLV38_01705 (rimO)
Enzymes [BR:
bwa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HLV38_01705 (rimO)
Ribosome biogenesis [BR:
bwa03009
]
Prokaryotic type
ribosomal protein modification factors
HLV38_01705 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QKF06981
UniProt:
A0A6M8J1K9
LinkDB
All DBs
Position
complement(389628..390974)
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AA seq
448 aa
AA seq
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MSSTAIDGMRAPRSVSFITMGCAKNEADTAHMRSDLIRAGYRIADDPAQADAVVVNTCSF
IQAATEESIEVILDAAGLDNVASGRARLVVSGCMPARYGDELEAEVPEAAAFVPCAKEDQ
IVEVIDRLLGVERSLGAIPTAVRLHGPAASEQAPPSAYVKISDGCNRFCSFCSIPYIRGR
YRSFPYERIRDEVSALVAAGTREVVLIAQDTGRWGDDFDEPLTLGWLVATLADEFPRTWL
RVMYIQPEGVTDELIEAVAAHDNVCSYFDVPFQHVSPRLLKLMRRTGSVAAFDALCARIR
ARIPDATLRTTLIAGFPGETDDEFEQLCAYVENCDLDYVGVFAYSREEGTRAFDLPDQVD
DDEKDERARRLRELADAVCAARVAQRVGRVLPVLVCGTEEDGQLVGRAMCQAPDVDGVTY
VEGAQVGEVVAVRIDDTLLYEMEGTVVP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaccgcaatcgacgggatgcgcgcaccccgcagcgtctcgttcatcaccatg
ggctgcgccaagaacgaggccgacacggcgcacatgcgcagcgacctgattcgcgccggc
taccgcatcgccgacgacccggcccaggccgacgccgtggtggtgaacacctgctcgttc
atccaggccgccaccgaggagagcatcgaggtgatcctggacgccgcgggcctggacaac
gtggcctcggggcgggcgcggctcgtggtgtcgggatgcatgcccgcgcgctacggcgac
gagcttgaggcggaggttcccgaggcggcggccttcgtgccctgcgcgaaggaggaccag
atcgtcgaggtgatcgaccgtctgctgggcgtcgagcgaagcctgggcgccatccccacc
gccgtgcgactgcacggcccggccgcgtccgagcaggcgcccccgtcggcctacgtgaag
atctcggacggctgcaaccgcttctgctcgttctgctcgattccctacatcagaggtcgg
tatcgcagctttccctacgagcgcattcgcgacgaggtgtccgccctggtggccgccggc
acgcgcgaggtggtgctgatcgcgcaggataccggccgctggggcgatgacttcgacgag
ccgctgaccctggggtggctggtcgcgacgctcgccgacgagttcccccgcacatggctt
cgcgtcatgtacattcagcccgagggcgtcaccgatgagctgatcgaggccgtggctgcg
cacgacaacgtgtgcagttacttcgacgtgcccttccagcacgtcagccctcggctgctg
aagctgatgcgccgtacgggctcggttgccgcattcgacgcgctgtgcgcccgcatccgc
gcgcgcattcccgatgccaccctgcgcaccacgctgatcgcgggcttcccgggcgagacc
gacgacgagttcgagcagctgtgcgcctacgtggagaactgcgacctcgattacgtgggc
gtgttcgcctactcgcgcgaggagggcacgcgcgccttcgacctgcctgaccaggttgac
gacgacgagaaggacgagcgggcgcggcgcctgcgcgagctggccgacgcggtgtgcgcg
gcgcgggtggcgcagcgcgtgggtcgcgtccttcccgtgctggtgtgcggaaccgaggag
gacggccagctggtcgggcgcgccatgtgccaggcgcccgatgtggacggcgtcacctat
gtcgagggcgcccaggtaggcgaggttgtcgcggtgcgcatcgacgacaccctgctgtac
gagatggaagggacggtcgtgccgtga
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