Berryella wangjianweii: HLV38_01750
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Entry
HLV38_01750 CDS
T09831
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bwa
Berryella wangjianweii
Pathway
bwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLV38_01750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwa03019
]
HLV38_01750
03016 Transfer RNA biogenesis [BR:
bwa03016
]
HLV38_01750
Enzymes [BR:
bwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HLV38_01750
Messenger RNA biogenesis [BR:
bwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HLV38_01750
Transfer RNA biogenesis [BR:
bwa03016
]
Prokaryotic type
tRNA degradation factors
HLV38_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
RNase_II_C_S1
KH-I_KHDC4-BBP
TRAM
FlgM
ExoU_mid_dom
KH_2
Motif
Other DBs
NCBI-ProteinID:
QKF06989
UniProt:
A0A6M8J6A4
LinkDB
All DBs
Position
complement(402032..404239)
Genome browser
AA seq
735 aa
AA seq
DB search
MEKIVESFELYGKQYRFETGELAKQASGAVLVTQGDTTVLVTAVVSKEEKDYDFFPLTVD
YIEKMYAVGRIPGGYLKREARPSEKGTLTARMIDRPIRPGFAEGFKNEVHVVATTLVADH
ENPIDTVCVQGASAALMVGAAPFDGPVSCVRVARNPETGAFICNPTYAEMDASDLDLVIA
GTREYISMIEAGGSEVSEDDMLAAMTFGQEAIAAFCEVQQRFLDRCAIEQVDWAIRTPDA
SIATRVNAFYDQMSAALKDADKQARMTKVAELKARIVAEQFSDEERAAWKGDIAAALKKL
EKHAMRRMIIETGERADGRSAEQIRPLHIVAGYLPRVHGSGLFQRGQTQALSIATLGMLN
EWQRLDTIEPVEGKRYMHNYNFPPYCTGEVGRMGAPKRREVGHGALAERALLPVLPSEDE
FPYAIRVVSEVLESNGSSSMASTCGSTLALMDAGVPIKAPVSGIAMGLIKEDDGVVILSD
IQGLEDFLGDMDFKVTGTEKGITALQMDNKARGLSVEILARALEQAKQGRAHILQGMLET
IEAPRAELSQFAPRIETIHIPVDKIRDVIGSGGKVVRGIQEETGAQIDIQEDGTIHVAAI
DGKAGEAAKAMILGIVKEPEVGEVYEGEVVGIKDFGAFVKLTPAKDGLLHISRVANGRVN
SVEDALSLGEVVKVQILEIDPKTGKISLDRLEKPDAPAGSAPSRDRGDRGDRGDRDNRPG
RASRPGRTPRRRHED
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcgtcgaatccttcgagctgtacggcaagcagtaccggttcgagacgggc
gagctggccaagcaggcctcgggcgccgttctcgtcacccagggcgacaccaccgtgctc
gtcacggccgtggtatcgaaggaagagaaggactacgacttcttcccgctgacggtggac
tacatcgagaagatgtacgccgtgggccgcattccgggcggctacctgaagcgcgaggcg
cgtccttccgagaagggcacccttaccgcgcgcatgatcgaccgccccatccgccccggc
ttcgccgagggcttcaagaacgaggtgcacgtggtggccaccaccctcgtggccgatcac
gagaacccgatcgacaccgtgtgcgtgcagggcgcctcggcggcgctgatggtgggcgcc
gcgcccttcgacggcccggtgtcgtgcgtgcgcgtggcgcgcaacccggaaacgggcgcg
ttcatctgcaaccccacgtacgccgagatggatgcctctgatctcgacctggtgatcgcg
ggcacccgcgagtacatctcgatgatcgaggcgggcggctcggaggtgtcggaggacgac
atgctggccgccatgaccttcggccaggaggccatcgcggccttctgcgaggttcagcag
cgcttcctcgaccgttgcgccatcgagcaggtggactgggccattcgcacgcccgacgcc
tcgatcgcaacccgcgtgaacgccttctacgatcagatgtcggccgccctgaaggacgcc
gacaagcaggcccgcatgaccaaggtggccgagctgaaggcccggatcgtcgccgagcag
ttcagcgacgaggagcgtgctgcctggaagggcgacatcgccgctgcgctgaagaagctt
gagaagcacgccatgcgccgcatgatcatcgagacgggcgagcgcgccgacggtcgcagc
gccgagcagatccgccccctgcacatcgtggcgggctacctgcctcgcgtgcacggctcg
ggcctgttccagcgcggtcagacgcaggcgctgtcgattgccaccctgggcatgctgaac
gagtggcagcgcctcgataccatcgagcccgtcgagggcaagcgctacatgcacaactac
aacttcccgccgtactgcaccggcgaggtgggccgcatgggcgccccgaagcgccgcgag
gtgggccatggcgccctggccgagcgcgccctgctgcccgtgctgcccagcgaggacgag
ttcccctacgccattcgcgtggtgtctgaggtgcttgagtccaacggctcgtcgtcgatg
gcctccacctgcggctccactttggcgctcatggacgccggcgtgccgatcaaggcgccg
gtgtcgggcatcgccatggggctcatcaaggaagacgacggcgtggtgatcctgtccgac
atccagggccttgaggacttcctgggcgacatggacttcaaggtcaccggcaccgagaag
ggcatcaccgccctgcagatggacaacaaggcccgcggcctgtccgtcgagatcctcgct
cgcgctcttgagcaggcgaagcagggtcgcgcccacattcttcagggcatgctggaaacc
atcgaggccccgcgcgccgagctgtcgcagttcgccccgcgcatcgagacgattcacatc
cccgtggacaagatccgcgacgtgatcggctccggcggcaaggtggtgcgcggcattcag
gaggagaccggcgcccagatcgacatccaggaggacggcaccatccacgtggccgccatc
gacggcaaggccggcgaggctgccaaggccatgatcttgggcatcgtcaaggagcccgag
gtgggcgaggtgtacgagggcgaggttgtgggcatcaaggacttcggcgccttcgtcaag
ctcacgcctgccaaggacggcctgctgcacatctcgcgcgtggccaacgggcgcgtgaac
tcggttgaggacgccctgagcctgggtgaagtggtgaaggtgcagattctcgagatcgac
cccaaaaccggcaagatctcgctcgaccgcctggagaagcccgatgccccggccggcagc
gcgccgtcgcgcgaccgcggcgatcgtggcgatcgcggtgaccgcgacaatcgcccgggt
cgcgcaagccgtcccggtcgcaccccgcggcgccgtcacgaggactag
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