Berryella wangjianweii: HLV38_04130
Help
Entry
HLV38_04130 CDS
T09831
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bwa
Berryella wangjianweii
Pathway
bwa03030
DNA replication
bwa03430
Mismatch repair
bwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLV38_04130 (dnaE)
03430 Mismatch repair
HLV38_04130 (dnaE)
03440 Homologous recombination
HLV38_04130 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwa03032
]
HLV38_04130 (dnaE)
03400 DNA repair and recombination proteins [BR:
bwa03400
]
HLV38_04130 (dnaE)
Enzymes [BR:
bwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLV38_04130 (dnaE)
DNA replication proteins [BR:
bwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLV38_04130 (dnaE)
DNA repair and recombination proteins [BR:
bwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLV38_04130 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QKF07395
UniProt:
A0A6M8IX99
LinkDB
All DBs
Position
complement(985618..989091)
Genome browser
AA seq
1157 aa
AA seq
DB search
MAFVHLHNHTEYSLLDGMTKIKDMVRRAADLGMPAVAITDHGVMSGVPELCQACEAVEAE
TGKKVKPLYGVEVYFTDDDGLRRDGKPRLYHLILLAKNSTGYHNLLKLVSESHVDNFYYK
PRTTFAMLQKYGEGVVATSACMAGIVPRHLDQGLYEEAVAWARKLASCFAPGDFYIELQN
QGPEVRTEAGRSQPELNKMLDRLARECGFKTVAANDFHYLLQEHADSHDVLLCIGMGRKV
NEPDRMRFPNDQFYMKTEEEMRAAFADFPEACDNTIEIAEKCTVELERDSILPRFPLPEG
ETEDTWFRKRVQEGLVARYGDPVPAEAQERADYEMGVIIQQGFPAYFLIVQEYIEWARSQ
GIGVGPGRGSAAGAIVAYAMGITDLDPLSNGLLFERFLSPERVEMPDIDVDFEDERRGEV
IDHIRDVYGEDHVAGVITYGKLQAKNAVRDAARVLDYPYSVGDRITKLIGDELGITIERA
LESNPDLKTAYSTDEDVHAVIDAALGIEGHLRNEGVHACATIICRDPMSDHVPMKRDTKG
GGIITQYDGHYTPDLGLLKMDFLGLRTLGVLSRACRNVKAAHGIDVVPEQIPTDDPLAFK
LMQDVNMDGLFQVEGPLYVSLFRRLPPQRFSDVVASIALNRPGPLESGMVDDYVQVASGK
VRPHYYDERLRPLLEETYGTMVYQEQIMQVSMVMSGFSAGKADKLRKAMGKKKLDIMRKL
KEDWTAGAIENRYDARIAEKIWDDAEKFAKYAFNKSHSAAYAILVMRTAYMKAHYPNEYM
AAVLSSYMGNTDKLIHYIASCNHNGTPVLPPDINSSNVEFTPVEGGIRFGLVGVRGVGRN
VADEIIAEREANGPYESLHDFVRRLDSKCYNRKTLEALVKGGAFDSTGYTRKQLMYFVDE
TPLLESAARNQKDRDAGQVSMFDMFGDDPDSGFSHDTPEPDGVEWPKQLKLKNEKEILKI
YVSDHPMRPYERAAARISKHRLGSLVDRKDDIKSDWFVGLVTGVATKLTKTGKRMATFSL
EDATGSMDCICFKYDDNADALVDDNIVQVKGKFERSDRGTQIVAYEVKVLDLPEDSDDGR
GMPPESLELRMTAHQIDESSLAHLNRLLKMYPGDDRVFLSVRSQAGKVFRTALPLSVDAR
SVFLRSELHQLLGTAAW
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgtacacctgcacaaccacaccgagtactcgctgcttgacggcatgaccaag
atcaaggacatggtgcgtcgcgcggctgatctgggcatgcctgcggtggcgatcaccgat
catggcgtgatgtcgggcgttcccgagctgtgccaggcgtgcgaggccgtggaggccgag
acgggcaagaaggtgaagcccctgtacggtgtggaggtgtactttaccgacgacgacggc
ctgcgtcgcgacggcaagccgcggctgtaccacctcatcctgctggccaagaactccacc
ggctatcacaacctgctgaagctggtcagcgagtcgcacgtggacaatttctactacaag
ccgcgcaccaccttcgccatgctgcagaagtacggcgagggcgtggtggccacgtcggcc
tgcatggcgggcatcgtgccgcgccatctcgaccaggggctgtacgaggaggccgtggct
tgggcgcgcaagctggcctcgtgcttcgcgcccggcgacttctacatcgagctgcagaac
caggggcccgaggtgcgcaccgaggcggggcgctcgcagcccgagctgaacaagatgctc
gaccgacttgcccgcgagtgcggcttcaagacggtggccgccaacgacttccattacctg
ctgcaggagcacgccgactcgcacgacgtgctgttgtgtatcggcatgggccgcaaggtg
aacgagcccgaccgcatgcgttttcccaacgaccagttctacatgaagaccgaggaggag
atgcgcgcggccttcgccgacttccccgaggcctgcgacaacaccatcgagatcgccgag
aagtgcacggtggagcttgagcgcgactcgatcctgccgcgcttccccctgcccgagggc
gagaccgaggacacctggtttcgcaagcgggtgcaggagggcctggtggcccgctacggc
gaccccgtgcccgccgaggcgcaggagcgtgccgactacgagatgggcgtgatcatccag
cagggcttccccgcgtacttcctgatcgtgcaggagtacatcgagtgggcgcgcagtcag
ggcatcggcgtgggcccgggccgcggttcggccgccggggccatcgtggcgtacgccatg
ggaatcaccgacctcgacccgctgtcgaacggcctgctgttcgagcgcttcctgtcgccc
gagcgcgtggagatgcccgatatcgacgtggacttcgaggacgagcgccgcggcgaggtg
atcgaccacatcagggacgtgtacggcgaagaccacgtggccggcgtgatcacctacggc
aagctgcaggccaagaacgcggtgcgcgacgccgcgcgcgtgctggactatccctacagc
gtgggcgaccgcatcaccaagctgatcggcgacgagctgggcatcaccatcgaaagggcg
ctggagtcgaatcccgacctgaagacggcctactccaccgacgaggacgtgcacgcggtg
atcgacgcggcgctgggcatcgagggtcacctgcgcaacgagggcgtgcatgcctgcgcc
acgatcatctgccgcgaccccatgagcgaccacgtgcctatgaagcgcgacaccaagggc
ggcggcatcatcacgcagtacgacggccattacacgcctgatctgggacttctgaagatg
gacttcctgggtctgcgcaccctgggcgtgctgtcgcgagcgtgtcgcaacgtgaaggcg
gcgcatgggatcgacgtggtgcccgagcagattcccaccgacgaccccctggcgttcaag
ctgatgcaggatgtgaacatggacggcctgttccaggtggagggcccgctgtacgtcagc
ctgtttcgccgcctgcccccgcagcgcttctcggacgtggtggcctcgatcgccctcaac
cgcccgggcccgctggagtcgggcatggtggacgactacgtgcaggtggcctcgggcaag
gtgcggccgcactactacgacgagcgcctgcgcccgctgctggaggaaacctacggcacc
atggtgtaccaggagcagatcatgcaggtgtcgatggtgatgagcggcttttcggcgggc
aaggccgacaagctgcgcaaggccatgggcaagaagaagctcgacatcatgcgcaagctg
aaggaggactggaccgccggcgcgatcgaaaaccgctacgacgcgcgcattgccgagaag
atctgggacgacgccgagaagttcgcgaagtatgcgttcaacaagtcgcactcggcggcc
tacgccatcctggtgatgcgcacggcctacatgaaggcgcactatcccaacgagtacatg
gcggcggtgctgtccagctacatgggcaacaccgacaagctgattcactacatcgccagc
tgcaaccacaacggcacgcccgtgctgccgcccgacatcaactcgtcgaacgtggagttc
acgccggttgagggcggcatccgcttcggcctggtgggcgtgcgcggcgtgggcaggaac
gtggcggacgagatcatcgccgagcgcgaggccaacgggccctacgagtcgctgcacgac
ttcgtgcgccgcctggactcgaagtgctacaaccgcaagacgctcgaagccctggtgaag
ggcggggccttcgattcgaccggctacacgcgcaagcagctgatgtacttcgtggacgag
acgcccctgctggaaagcgcggcccgcaaccagaaggaccgcgacgccggccaggtgagc
atgttcgacatgttcggcgacgatcctgactcgggcttctcgcacgatacgcccgagcct
gacggcgtggagtggcccaagcagctgaagctgaagaacgagaaggagatcctgaagatc
tacgtgtcggaccatcccatgcgcccttacgagcgcgcggcggcccgcatctcgaagcat
cgtctgggatcgctggtcgatcgcaaggacgatatcaagtcggattggttcgtgggcctg
gtgacaggcgttgccacgaagctcaccaaaaccggcaagcgcatggccaccttcagcctt
gaggacgccacgggctcgatggactgcatctgcttcaagtacgacgataacgccgacgcc
ttggtggacgacaacatcgtgcaggtgaagggcaagttcgagcgcagcgaccgcggcacg
cagatcgtggcctacgaggtgaaggtgctcgacctgcccgaggattccgacgacgggcgc
ggcatgccgcctgagtcgctggagcttcgcatgaccgcgcaccagatcgacgagtcgagt
ctggcgcacctgaaccgtctgctgaagatgtacccgggagatgaccgcgtgttcctgagc
gtgcgcagtcaggcgggcaaggtgtttcgtacggcgctgcccctgagcgtggacgcgcgc
agcgtgtttctgcgctccgagctgcaccagctgctggggacggccgcatggtag
DBGET
integrated database retrieval system
