Berryella wangjianweii: HLV38_04305
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Entry
HLV38_04305 CDS
T09831
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bwa
Berryella wangjianweii
Pathway
bwa00260
Glycine, serine and threonine metabolism
bwa00630
Glyoxylate and dicarboxylate metabolism
bwa00670
One carbon pool by folate
bwa00680
Methane metabolism
bwa01100
Metabolic pathways
bwa01110
Biosynthesis of secondary metabolites
bwa01120
Microbial metabolism in diverse environments
bwa01200
Carbon metabolism
bwa01230
Biosynthesis of amino acids
bwa01240
Biosynthesis of cofactors
bwa04981
Folate transport and metabolism
Module
bwa_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HLV38_04305
09102 Energy metabolism
00680 Methane metabolism
HLV38_04305
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HLV38_04305
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HLV38_04305
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HLV38_04305
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HLV38_04305
Enzymes [BR:
bwa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HLV38_04305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
DUF8101
Rnk_N
Motif
Other DBs
NCBI-ProteinID:
QKF07425
UniProt:
A0A6M8IXC4
LinkDB
All DBs
Position
complement(1025315..1026568)
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AA seq
417 aa
AA seq
DB search
MALNYVPQTDPEVADALAQELARQRDTIELIASENIVTPAVMETMGTVLTNKYAEGYPGK
RYYGGCEKVDIVENLAIERAKKLFGAAFANVQTHSGSQANYAAYSALVKPGDTVLGMSLD
NGGHLTHGSKVNFSGKLFNVVSYGLDEDERIDYDRMQALAHEHQPKLIVAGASAYPRVID
FERIAQIAREVGAYVLVDMAHIAGLVATGHHPNPVPYADVVTSTTHKTLRGPRGGLILTN
NEELAKKINSAVFPGCQGGPLMHVIAAKAVAFGEALQPSFRDYIEAVVANCQAMGKGMTD
GGLRLVSGGTDNHLCLVDLTPADVTGKDAERLLEEVGLTVNKNTIPNEQRSPFVTSGIRV
GTAAGTTRGFDANEFYRIGACIAATVFNVNDPVRLDAVKAEVSALIAAHPLYPELSY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcacttaactacgtaccgcagaccgatcctgaggtggccgacgcccttgcgcaggag
ctggcgcgccagcgcgacaccatcgagctgatcgcctccgagaacatcgtcacgcccgcg
gtgatggagaccatgggcaccgtgcttaccaacaagtacgccgaggggtatcccggcaag
cgctactacggcggctgcgagaaggtcgatatcgtcgagaacctggccatcgagcgcgcc
aagaagctgttcggcgccgcattcgccaacgtgcagacgcactcgggctcgcaggccaac
tatgcggcgtactccgccttggtgaagccgggcgacaccgtgctgggcatgagcctggac
aacggcggtcacctcacccacggctcgaaggtgaacttctcgggcaagctgttcaacgtg
gtgtcgtacggcctggatgaagacgagcgcatcgactacgaccgcatgcaggccctggcg
cacgagcatcagcccaagctgatcgtggccggcgcttcggcgtatcctcgcgtgatcgac
ttcgagcgcattgcccagatcgcacgcgaggtaggcgcctacgtgctggttgacatggcg
cacatcgcgggtctggtggccacgggccatcatcccaacccggttccctacgccgatgtg
gtcacttccaccacgcacaagaccctccgcgggccccgtggcggcctgatcctcaccaac
aacgaggagcttgccaagaagatcaactccgctgtgttccccggatgccagggcggtccg
ctgatgcacgtgatcgcggcgaaggccgtggcgttcggcgaggccctgcagccctcgttc
cgcgactacatcgaggccgtggttgcgaactgccaggccatgggcaaaggcatgaccgac
ggcggcctgcgcctggtgtcgggcggcaccgacaaccacctgtgcctggtggacctgacc
ccggccgacgtgacgggcaaggacgccgagcgcctgctggaggaagtgggcctgacggtg
aacaagaacacgattcccaacgagcagcgctctcccttcgtcacgtcgggcattcgcgtg
ggaaccgctgcgggcaccacgcgcggcttcgatgccaacgagttctaccgcatcggcgcc
tgcattgcggccaccgtgttcaacgtgaacgacccggtgaggcttgatgcggtgaaggct
gaggtgagcgccttgatcgcggctcatccgctgtatcccgagctttcctactag
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