Berryella wangjianweii: HLV38_05395
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Entry
HLV38_05395 CDS
T09831
Name
(GenBank) ATP-dependent DNA helicase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bwa
Berryella wangjianweii
Pathway
bwa03030
DNA replication
bwa03430
Mismatch repair
bwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLV38_05395
03430 Mismatch repair
HLV38_05395
03440 Homologous recombination
HLV38_05395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwa03032
]
HLV38_05395
03400 DNA repair and recombination proteins [BR:
bwa03400
]
HLV38_05395
Enzymes [BR:
bwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLV38_05395
DNA replication proteins [BR:
bwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLV38_05395
DNA repair and recombination proteins [BR:
bwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLV38_05395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
QKF08036
UniProt:
A0A6M8J863
LinkDB
All DBs
Position
1296015..1298660
Genome browser
AA seq
881 aa
AA seq
DB search
MQRDAADRAGSADPACHAAPRFQASAQPEDSARPAAVDAALAAGALELSDNPDDTPVRVE
SASKVADDVASSEAHGSASADVAPLVSAKDVIAAATAAVRAQLQRAPAGASAAPGAVQTA
LFPAESPQRRIFSLRALRRRRTEPLMRRRSLRPAATALIDDARPSLVVPPSQEIEDAFSA
QGLLGAIYPAFEPRGEQVQMAQAVRRSLEVSENLVVEAGTGVGKSMAYLVPAALTAVRSQ
ATIGVATNTNALLDQLVYSELPALATALAATDPQAPPLSWAPLKGLTHYPCLRKIDRLAY
DGPGTREVAGEERNQAPALATLLSYVEQSAFDDMDGLKLDFRLLPRWEITTTSQDCLKRK
CSYFGSMCFGHGARRYAETCNVVVTNHALLCCDLSADGGLLPEARAWVVDEAHGFEAEAR
RAFTSSIESASVLRVASRVSNAGSTRNVLTRLASRMKQASPETAGTFHALLGKATAAGEV
FSQAAGAYAAQVKGLLFFDDRKANRSYETTELWLNSHVRASSPFGELAISARALGESAAK
LSRQLQNLVAFIDDVPAAAEPQREMAAMVYDLDALADTVRLVFDDAPSSYVYQADLHRKK
DRLTDAVRAVPLEVGHRLNEALYARADAVVYASATLSVAGTFDAFSRAAGLGGPEGAPAE
TLQVDSSYDFDRNMTVYVVSDMPEPASSSYLPALKKLLVGVHRAQRGSMLTLFTNRREME
SCFDDVQPQLKRDDLRLVCQKWGVSAKGLRDEFIADESLSLFALKSFWQGFDAPGSTLRG
VVIPKLPFARPTDPLSCERGARDDRAWFHYVLPQAVIELKQAAGRLIRRADDAGVVILAD
RRLVTKAYGRTVLASMPSKTVRICTAAEVIRAIEAQQDAER
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgacgccgccgatcgtgcgggctccgccgaccctgcatgtcatgccgccccg
cgctttcaggcgtctgcgcagcctgaggattcggcgcgccccgctgccgtggacgccgcg
cttgcggccggcgccttggagctttcggataatccggatgacacgccagtgcgggtggag
agcgcctcgaaggtggcagacgacgttgcgagctcggaggcgcacggttcggcatccgcc
gacgttgcgcccctcgtttctgcgaaggacgtgatcgcggcggccaccgcagcggtccgc
gcccagctgcagcgtgcgcccgcaggcgcgagcgccgcgcccggtgccgtgcagacggcg
ctgttccctgcagaatcgccgcagcggcgcatcttctcgttgcgcgccctgcgtcgccgc
cgtacggagcccctgatgcgtcgtcgatcgctgcgccctgcggcgacagccctgatcgac
gacgcccgcccttcgctggtcgttcctccttctcaggaaatcgaggacgcgttcagcgct
cagggcctgttgggagcgatctaccccgccttcgagccacgtggcgagcaggtgcagatg
gcccaagcggtcaggcgttcgcttgaggtaagcgagaacctggtggtggaggcgggaacg
ggcgtgggcaagtcgatggcctatctggtgcccgccgcgctgacggcggtgcggtcgcag
gccaccatcggtgttgcgacgaacacgaacgccctgctcgatcagctggtgtacagcgag
ctgcctgcgcttgccaccgcgcttgccgctaccgacccgcaggcgccgccgctttcatgg
gcgccgctgaagggcctgacccactacccgtgcctgcgcaagatcgaccgtctggcctat
gacggcccaggcacgcgcgaggtggcgggagaggagcgcaatcaggctcccgccttggcc
acgctgctttcgtatgtggagcagagcgccttcgacgacatggatggcctgaagctcgac
tttcgcctgcttccccgctgggagataaccactaccagccaggattgcctgaagcgcaag
tgctcgtacttcggcagcatgtgctttgggcacggcgcccgccgctacgccgaaacgtgc
aacgtggtggtgacgaaccatgcgcttctgtgctgcgacctgtctgccgatggcggcttg
ctgcccgaggcgcgggcctgggtggttgacgaggcccacggcttcgaggccgaggcccgc
cgcgccttcaccagctcgatcgagtcggcctcggtgctgcgcgttgcctcccgcgtgtcg
aacgcgggctcgacgcgcaacgtgctgacgcgcctggccagtcgcatgaagcaggcttcc
cccgaaaccgcaggcaccttccatgccctgctgggcaaggccacggcggcgggcgaggtg
ttctcgcaagctgcaggcgcctacgccgcccaggtgaagggcctgctgttcttcgacgac
cgcaaggccaaccgcagctacgaaaccaccgagctgtggctgaacagccacgtgcgcgcc
agctcacccttcggcgagcttgccatcagcgcgcgcgccttgggcgagtcggcagccaag
ctgtcgcgccagctgcagaatctcgtggccttcatcgatgacgtgcctgccgccgccgag
cctcagcgcgagatggccgcgatggtgtacgacctggatgcccttgcggatacggtgcgc
ctggtgttcgatgatgcgccctcttcgtacgtgtaccaggccgaccttcaccgtaagaag
gaccgtctgaccgatgcggttcgcgcggtgccccttgaggtgggacatcgcctgaacgag
gccctgtacgcccgcgccgacgcggtggtgtacgcctcggccacgctgtcggtggcgggt
acgttcgacgcgttctcgcgcgcggcggggttgggaggccccgaaggtgcgccggcggaa
accctgcaggttgactcgagctacgacttcgaccgaaacatgacggtgtacgtggtcagc
gacatgcccgagccggcgtcgagctcttacctgcccgcgctgaagaagctgctggtggga
gtccatcgtgctcagcgcggatcgatgcttaccctgttcaccaatcggcgcgagatggag
agctgcttcgacgatgtgcagccgcagctgaagcgggacgacctgcgtctggtgtgtcag
aagtggggggtgtcggccaagggcctgcgcgacgagttcatcgccgacgagagcctgtcg
ctgttcgcgctgaagtcgttctggcagggcttcgatgcaccggggtccacgctgcgcggc
gtggtgattcccaagttgcccttcgcccgccccaccgacccgctgtcgtgcgagcgcggg
gcacgtgacgaccgcgcgtggtttcactacgtgctgccgcaggccgttatcgagctgaag
caggcggcgggacggctgattcgccgcgccgacgatgccggcgtggtgatcttggctgat
cggcgcctggtgaccaaggcgtacgggcgaacggtgctggcgtccatgcccagcaagacg
gtgcgcatctgcacggcagccgaggtgattcgcgcaatcgaggctcagcaggacgctgag
cgatga
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