Bacillus wiedmannii: CT694_00640
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Entry
CT694_00640 CDS
T05831
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bwd
Bacillus wiedmannii
Pathway
bwd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bwd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CT694_00640 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bwd03021
]
CT694_00640 (rpoB)
03400 DNA repair and recombination proteins [BR:
bwd03400
]
CT694_00640 (rpoB)
Enzymes [BR:
bwd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CT694_00640 (rpoB)
Transcription machinery [BR:
bwd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CT694_00640 (rpoB)
DNA repair and recombination proteins [BR:
bwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CT694_00640 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AZJ18346
LinkDB
All DBs
Position
113747..117280
Genome browser
AA seq
1177 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYSVDECKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEITELLGDNEYLSNTLEKDNTDSTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAAEGTILDRRTLDRILPYLEKNIGFKTAKPMGGVVEGDVELQSIKIYAPESEGERVI
NVIGNANITRDVKHITPGDILASISYFFNLLYKVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNEFG
FIETPYRRVDPESGLVTGQVDYLTADEEDNYVVAQANMKLSEEGEFLSEDIVARFRGENI
VTNKERIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPIVGTG
MEYVSAKDSGAAVICKHPGVVERVEAREVWVRRYVEVDGQTVKGDLDRYKMQKFIRSNQG
TCYNQRPIVSVGNEVVKGEILADGPSMELGELALGRNVLVGFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDEL
PPGVNQLVRAYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAARYLGIHIATPVFDGAREEDVWGTIEEAGMANDAKTILYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKMMSSDDKEIEMRDTEDDDDHQSADKLNVEVETTKE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatacggacgccaccgccaacgaagaagttatgcccgtatt
agtgaagtattagagttaccaaatcttatcgaaattcaaacctcttcttatcagtggttt
cttgatgagggtttgcgagaaatgttccaggacatttctccgatcgaagactttacggga
aatctatcgcttgaatttatcgactacagcttaggtgaacctaaatactctgtagacgaa
tgcaaagagcgtgatgtgacgtatgcagcaccacttcgtgtaaaagtgcgtctaatcaac
aaggaaactggtgaagtaaaagaacaagatgtgttcatgggagatttcccactcatgaca
gagactggaacattcgtaattaacggtgcagaacgtgttatcgtttcccagttagttcgc
tctccaagcgtatactatagtggcaaagtggataaaaacggaaaacgtggttttactgct
actgtaattccaaaccgcggagcttggttagagtatgagacagatgctaaggatgttgta
tatgtgcgtattgaccgtacgcgtaaacttcctgtaactgttttgttacgcgcattaggg
tttggctctgatcaagaaatcaccgagcttttaggtgataacgaatacttaagcaacaca
ttagaaaaagacaacacagatagcacagaaaaagcattgcttgaaatttatgagcgtcta
cgtcctggtgaaccaccaacagtagaaaatgctaagagcttacttgtgtctcgtttcttc
gatccaaagcgctacgatttagcaaatgtaggtcgctataagatcaacaagaagttacac
attaaaaacagattgtttaatcaacgtttagctgaaacattagtggatccagaaactggt
gaaattttagcggcggaaggaacaatcttagatcgtcgtacacttgatcgcattttacct
tacttagagaaaaacattggattcaaaacagcgaaaccaatgggtggagtggtagaaggc
gatgttgagctgcaatctattaagatttatgctcctgagtcagaaggcgaacgcgtaatt
aatgtaattggtaatgcaaatattactcgtgatgtaaaacacatcacaccaggcgatatc
cttgcttctatcagttacttcttcaacctactatacaaagtgggggatacagatgatatc
gaccatttaggaaaccgtcgtctgcgttctgttggagaactattacaaaatcaattccgt
atcggtctttctcgtatggaacgtgttgttcgtgagagaatgtcgattcaagatacaaat
gcaattacaccacaagcgttaattaacattcgcccggttattgcatctattaaagagttc
ttcggaagttctcagttatctcagttcatggatcaaacaaacccattagcagagttaact
cacaaacgaagactatctgcattaggacccggtggtttaacgcgtgagcgcgcaggcttt
gaagtacgtgacgttcactactctcactatggtcgtatgtgtccgattgaaacgccagag
ggaccaaacatcggtttgattaactcattatcatcgttcgcgaaagtaaatgagtttggt
ttcattgaaacaccataccgtcgtgttgatccagaatctggtcttgtaacagggcaggtt
gattacttaacagcagatgaagaagataattatgttgtagcccaagcgaatatgaaatta
tctgaagaaggagaattccttagcgaagatatcgtagctcgtttccgtggtgaaaacatt
gtcacaaataaagaacgcatcgactacatggatgtatctccaaaacaagtagtgtcggca
gcgacagcttgtattccgttcttagaaaacgatgactctaaccgcgcacttatgggagcg
aacatgcaacgtcaggcggttccgttaatgaatccggaatctccgattgtaggtacaggt
atggagtacgtatcagcaaaagactcaggtgctgcagtaatctgtaaacatcctggtgtt
gttgaacgcgtagaagcacgtgaagtttgggtacgtcgctatgtagaagttgacggtcaa
acagtaaaaggcgacttagatcgttacaaaatgcaaaaattcattcgttctaaccaagga
acttgctacaaccaacgtccaatcgtaagtgttggaaatgaagttgtaaaaggtgagatt
cttgcggatggtccttctatggaattaggtgaactggcacttggacgtaacgtgcttgtt
ggcttcatgacttgggacggttataactacgaggatgcgatcattatgagtgagcgcctt
gtaaaagatgatgtgtacacttctattcatattgaagaatatgagtcagaagctcgtgat
acgaagcttggaccagaagaaattacacgtgacattccaaacgttggggaagatgcatta
cgcaaccttgacgagcgcggtatcattcgcgttggtgcggaagtaaaagatggagattta
cttgttggtaaagtaacacctaaaggtgtaacagaattaacagctgaagaacgtctatta
catgctatctttggagaaaaagcacgtgaagtacgtgatacatcactacgtgtaccacac
ggtggtggcggtattatcttagacgtaaaagtattcaaccgtgaagatggcgatgaattg
ccaccaggcgtgaatcaacttgtacgtgcatatatcgttcaaaaacgtaaaatctctgaa
ggtgacaagatggccggacgtcacggtaacaaaggtgttatctctcgtattttaccagaa
gaagatatgccttacttaccagacggtacgccaatcgatatcatgttaaacccattaggg
gtaccatctcgtatgaatatcggtcaggtattagagcttcatcttggtatggcagcaaga
taccttggtattcacattgcaacaccagtattcgatggtgctcgtgaggaagatgtttgg
ggcacgattgaagaagctggtatggcaaatgacgcgaaaacaatcctgtatgacggacgt
actggtgaaccattcgataaccgcgtatctgttggtgtcatgtatatgatcaaacttgcg
cacatggttgacgataaacttcatgctcgttctactggaccatactcacttgtaacgcag
cagcctcttggaggtaaagctcagttcggtggacagcgtttcggtgagatggaggtttgg
gcacttgaagcttacggtgctgcttatactcttcaagaaatcttaacagtgaagtctgat
gatgttgttggacgtgttaagacgtatgaagcaattgttaaaggtgaaaatgttccagaa
ccaggcgttcctgaatcattcaaagtattgattaaagagctgcaaagtttaggtatggac
gttaaaatgatgtctagcgacgataaagaaattgaaatgcgtgatacagaagatgacgat
gatcatcaatcagcagataaattgaatgtcgaagttgagacaactaaagaataa
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integrated database retrieval system
