Bacillus mycoides KBAB4: BcerKBAB4_0018
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Entry
BcerKBAB4_0018 CDS
T00642
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03030
DNA replication
bwe03430
Mismatch repair
bwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BcerKBAB4_0018
03430 Mismatch repair
BcerKBAB4_0018
03440 Homologous recombination
BcerKBAB4_0018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwe03032
]
BcerKBAB4_0018
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_0018
Enzymes [BR:
bwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BcerKBAB4_0018
DNA replication proteins [BR:
bwe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BcerKBAB4_0018
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BcerKBAB4_0018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
TIP49
AAA_22
AAA_5
AAA_16
DnaX_C
PIF1
AAA_19
Rad17
AAA_assoc_2
AAA_14
Mg_chelatase
RCF1-5-like_lid
DNA_pol3_delta_C
AAA_18
AAA_7
TniB
TsaE
YgaB
AAA_24
ABC_tran
nSTAND3
AAA_2
Sigma54_activat
DUF815
NPHP3_N
MerR_2
AAA_28
RNA_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ABY41287
UniProt:
A9VN36
LinkDB
All DBs
Position
25217..26905
Genome browser
AA seq
562 aa
AA seq
DB search
MSYQALYRTWRPQKFEDVVGQKHVTKTLQNALLQEKASHAYLFSGPRGTGKTTIAKVFAK
AINCEHAPVAEPCNECPSCLGITQGSISDVLEIDAASNNGVDEIRDIRDKVKYAPSAVGY
KVYIIDEVHMLSMGAFNALLKTLEEPPGHVIFILATTEPHKIPATIISRCQRFEFRKISV
NDIVERLSTVVTNEGTQVEDEALQIVARAAEGGMRDALSLIDQAISYSDETVTSEDVLAV
TGSVSQRYLGDLVECIRENDVSRALRIIDEMMSKGKDPVRFMEDFIYYYRDMLLYQTSPQ
LEHMLERVIVDDQFRTLSEEMQPEVIYEIIHTLSKGQQEMKWTNHPRIFLEVVMVQLCQQ
FMMQANGVDRLQAIMNRVQQLEKELEQVKKNGVPAGVQQEVRETRATPKPVRTGSMKIPV
GRVNEVLKQAKRQDLEQLKAVWGELLGRLKSHNKVAFAVLLENSEPVAASDDTYVLAFQY
EIHCKMASENREAMDTLEQTLFELLSKRLNMIAIPKSEWGKIREDFLQREGGDSEESPEQ
KEDPLIEEAVKLVGQELIEIKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgtcataccaagcgttataccgaacatggagaccgcaaaaattcgaagatgtagtcggt
caaaagcacgtgacaaaaacgttgcaaaatgcccttcttcaagagaaagcttcacatgct
tatttgttttcgggtccgaggggaacagggaaaacgacaattgcaaaagtatttgcaaag
gcaattaactgtgaacacgccccggtagctgaaccttgtaatgaatgtccttcttgttta
ggaattacacaagggtctatttcagatgtattagaaattgatgcggcttcaaataacggt
gtagatgaaattcgagatataagagataaagtaaaatatgctccaagtgctgtaggatat
aaagtatacattattgatgaagttcacatgctttctatgggtgcctttaatgcgcttttg
aaaactttagaagagccgccaggacatgttatttttattctggcgacaacagaaccgcat
aaaattccagctacaattatttcgcgttgtcagcgttttgagtttcgaaagatatcagta
aatgatatcgttgagagattatcgacggtcgtgacaaatgaaggtacgcaagtagaagat
gaagcgttacaaatcgtagcgcgtgccgccgaaggtggtatgcgtgatgcgctcagtctt
attgatcaagctatttcttatagtgatgaaacggtgacgagtgaagatgttttagctgta
acaggatctgtatctcagcgatatttgggtgacctggtagaatgtatacgtgaaaatgat
gtatcaagagcgttacgtattatagatgagatgatgagtaaagggaaagatccagttcgc
tttatggaggatttcatttactactatcgtgatatgcttttatatcaaacttcaccacaa
ttagaacatatgttggaacgggtaattgtagatgatcaattccgtacgttaagtgaagaa
atgcaaccggaagtaatctatgaaattattcatacccttagtaagggacaacaggagatg
aagtggacaaaccatccaagaatattcttggaagttgttatggtgcaactgtgtcagcag
tttatgatgcaagcaaacggcgtagatcgtttacaagcgattatgaatagggtgcagcag
ttggagaaagagttagagcaagttaaaaagaatggtgtgccagctggtgtgcagcaggaa
gtaagagagacgcgggcaacaccaaaaccggtacgaacagggagtatgaaaattcctgtt
ggacgtgtgaatgaagtgttaaagcaagcgaagcgtcaagatttagaacagttaaaagct
gtatggggcgaattattaggaaggctcaagtcacataacaaagtagcatttgctgtttta
ttagaaaatagtgaaccagttgcggcttcggatgatacctatgtgttagcatttcaatat
gagattcattgtaaaatggctagtgaaaatcgagaagcgatggatacattggaacaaact
ctttttgaattgttaagtaaaaggttaaatatgattgctatcccaaaaagtgaatggggt
aaaattcgtgaagactttttacaacgcgaaggcggggattctgaagaaagcccagaacaa
aaagaagatcctcttatagaagaggctgtaaaattagtagggcaagaacttattgaaata
aaagagtaa
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