Bacillus mycoides KBAB4: BcerKBAB4_1040
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Entry
BcerKBAB4_1040 CDS
T00642
Name
(GenBank) ATP-dependent nuclease subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bwe
Bacillus mycoides KBAB4
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_1040
Enzymes [BR:
bwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BcerKBAB4_1040
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BcerKBAB4_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_16
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ABY42290
UniProt:
A9VJ01
LinkDB
All DBs
Position
1118237..1121752
Genome browser
AA seq
1171 aa
AA seq
DB search
MSLRFVIGRAGSGKSTLCLHEVQEELKQRPRGKTILYLVPEQMTFQTQQALIGSEDVRGS
IRAQVFSFSRLAWKVLQEVGGASRLHIDEAGVHMLLRKIVESRKDGLSVFQKAAEQNGFF
EHLGSMIAEFKRYNVTPSNVYEMWQQLDTHSSSAEQKLLANKVYDLQLLYDDFERALIGK
YLDSEDYLQLLIEKLSDSEYVKGAEIYIDGFHSFSPQELEIVRGLMRLGTRVTITLTIDE
KTLAQPVNELDLFYETTLTYERIKQVAREEKIEVEKTIPLMKQPRFHSQALAHLEMHYEA
RPNEKFHGEASVTISTAANLRAEVEGVAREIRRLVATEDYRYRDIAVLLRNGESYYDVMR
TLFTDYNIPHFIDEKRPMSHHPLVECIRSALEIISGNWRYDAVFRCVKTELLYPLDVRKE
AMREEMDEFENYCLAYGVQGKRWTSEDPWMYRRYRSLDDASEMITDSEREMEEKINRLRD
VVRTPVIRMQKRLKRAGTVMQMCEAVYLFLEELDVPKKLEALRIRAEESGDFLFATDHEQ
VWEEVMSLLDTFVEMLGEEKMSLSMFTDVMTTGLEALQFANIPPSLDQVLVANIDHSRLS
DIKATFIIGVNEGVIPAAPMDEGMLSDEERNVLTAAGIELAPTTRQTLLEEQFVMYQMVT
RASEKLYISCPLADEEGKTLLASSFIKKIKRMFPDVKESFITNDVNDLSRSEQLSYVATP
EVTLSYVMQQLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLS
TDVSRDLYGDTIKGSVSRMELFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKR
IADKLLRENRTWADLSIKECEHLSALVIEEIAPLLQRQILLSSNRHFYLKQKLQQIIFRT
SLILREHAKSSGFVPVDLEVPFGMGGTGSLPPMEFALPNGVKMEVVGRIDRVDKAEDESG
TFLRIIDYKSSSKALDLTEVYYGLALQMLTYLDVVTSNAHTWMKKGSTASPAGVLYFHIH
NPIVEMKGDASEEEIEKEILKKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGS
FSARSSIASEQEFNVLQKYVHHSFENIGKDITEGVIDIAPYKKGNKAACTFCNFKSVCQF
DESLEDNQFRTLKDMKDSEAMEKIREEVGGE
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcgatttgtgattggtagagctggaagtggaaaaagtacactttgtttacac
gaagtgcaagaagagttaaaacagcgcccaagagggaaaacaatattatatcttgtgcca
gaacagatgacattccaaacgcagcaggcgttaattgggagcgaagatgtaagaggttct
attcgggcacaagtttttagtttttcgcgattagcgtggaaggtgctgcaagaagttggc
ggagcgagtcgtcttcatattgatgaagctggtgtacatatgttgcttcgtaaaattgta
gaatctcgtaaagatggactatctgtgtttcaaaaagcagcggagcaaaacggtttcttt
gaacatcttggtagtatgattgctgagtttaaacgttacaatgtgacgccgtctaacgta
tatgaaatgtggcaacaattagacacgcatagcagtagtgcagagcaaaagctactagcg
aataaagtttatgatttacagttactatatgatgattttgaacgtgctttaatcggaaag
tatttagattcagaagactacttacaattattaattgagaagctttcagactctgagtat
gtaaaaggcgcggaaatttatatagatggattccattcattttctcctcaagagttagaa
atcgttagagggctaatgagattaggaactagagtaacaataacattaacgatagatgaa
aaaacgttagcgcagccagtgaatgaactagatttattttatgaaacgacgttaacgtat
gaaagaataaaacaagtagcgcgtgaagagaaaatagaggttgaaaaaacaattccactt
atgaaacagccgcgttttcattcgcaagcattagcacatttagaaatgcattacgaagcg
cgtccaaatgaaaaatttcacggcgaagcgagtgtgacaattagtacagcagctaattta
cgagctgaagtagaaggtgttgctcgtgaaattcgaagacttgtggcgactgaagactat
cgttaccgagatatcgcagtccttcttcgtaacggagaaagttattacgatgtaatgcga
acgttatttacggattataatatcccgcatttcatcgatgaaaaacgcccgatgtcacat
catccgctagtagaatgtattcgttcggctttagagattattagcggaaattggcgttat
gatgcagtgttccgctgcgtgaaaacagagcttttatatccattagatgtaagaaaagaa
gcgatgcgcgaagagatggatgagtttgaaaactactgtttagcgtacggtgtacaaggg
aagagatggacttctgaagatccgtggatgtatcgtcgttatcgttctcttgatgatgcg
agcgaaatgataacagacagtgagcgtgaaatggaagagaaaataaatcgacttcgcgac
gttgtaagaacgccagttattcgtatgcagaaaagactgaagcgtgctggaacagttatg
caaatgtgcgaagcggtatatttatttttagaggagcttgacgttccgaaaaaactagag
gcattacgtattcgtgcagaagaaagcggagatttcttatttgcgacagaccatgagcaa
gtatgggaagaagtgatgagtcttcttgatacgttcgttgagatgcttggcgaagagaag
atgtccctgtctatgtttactgatgtaatgacgacaggtcttgaggcacttcaatttgcg
aacattccgccgtcactagatcaagtgttagttgctaatattgatcattctagattatca
gatattaaagcgacgttcattattggcgtaaatgaaggcgtgattccagcagcacctatg
gatgaaggtatgctttctgatgaggaaagaaatgttctcaccgctgcaggtatcgaatta
gcaccaacgacgagacaaactttattagaagaacagttcgttatgtatcaaatggtgacg
agagcatctgagaagttatacatttcctgtccgcttgcggatgaagaaggaaagacgtta
cttgcttctagttttattaagaaaataaaaagaatgttccctgatgtgaaagaatcgttt
attacgaatgatgtaaatgacttatcgcgttcggaacaactctcatatgtagcaacgcca
gaagtaactttgtcttacgtcatgcagcaactgcaaacgtggaagcgatacggatttgaa
ggcaatttagacttttggtgggacgtatataacttctacgttacttcagatgaatggaag
caaaaaagtagccgtgtgttatcgagtttattctaccgaaatcgtgcacagaaactaagt
acagatgtaagtagggatttatatggagatacaattaagggaagcgtttctcgtatggaa
ctatttaatcgctgtgcgtacgctcatttcgctcagcacggtttatcgctaagagagcgc
gatattttcaaacttgatgcgccagatatcggtgaattattccacgcggcgctgaagaga
attgcagacaagctattacgtgaaaatcgtacttgggcggatttatcaataaaagagtgt
gagcacctttctgctttagtaatagaagaaattgcaccattattacaaagacaaatttta
ttaagttcaaaccgtcatttctatttaaaacaaaaactacaacaaatcattttccgtaca
tcacttattcttcgtgaacatgcgaagtcgagtggctttgtaccagttgatttagaagta
ccgttcggtatgggtggtactggatcgcttccgccaatggaatttgcgttgccaaatggc
gtgaagatggaagtagttggccgtattgaccgtgttgataaggcggaagatgagagtggt
acgttccttcgtattattgactataaatcaagttcgaaagcgttagatttaacagaagtg
tattacggactcgcacttcaaatgttaacgtatttagatgttgttacttcaaatgcacat
acgtggatgaaaaagggtagtactgcatcaccggcgggtgtattgtatttccatattcat
aacccgattgttgagatgaaaggcgatgcatctgaagaagaaattgagaaagaaatttta
aagaaatttaaaatgaaagggctcgtactaggagatgctgatgttgtgcgtttgatggat
aataaactttcaacaggaagctctgatattatttctgctggtctgaaaaaagatggtagt
tttagtgcgcgttctagcattgcaagtgaacaagagtttaacgtacttcaaaaatatgta
caccactcgtttgaaaatatcggaaaagacattacagaaggtgttatcgatattgctcct
tacaaaaaggggaataaagcggcatgtacgttctgtaacttcaaatctgtttgtcaattt
gatgaatcacttgaagataatcaattccgtacgttaaaagatatgaaagatagcgaagcg
atggagaaaattagagaggaggttggcggagaatga
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integrated database retrieval system
