Bacillus mycoides KBAB4: BcerKBAB4_2284
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Entry
BcerKBAB4_2284 CDS
T00642
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BcerKBAB4_2284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwe03019
]
BcerKBAB4_2284
03009 Ribosome biogenesis [BR:
bwe03009
]
BcerKBAB4_2284
Enzymes [BR:
bwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BcerKBAB4_2284
Messenger RNA biogenesis [BR:
bwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BcerKBAB4_2284
Ribosome biogenesis [BR:
bwe03009
]
Prokaryotic type
rRNA helicases
BcerKBAB4_2284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABY43501
UniProt:
A9VFW0
LinkDB
All DBs
Position
2345771..2347123
Genome browser
AA seq
450 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFV
LPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPDSK
QTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDDLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQRQIIEQPMIKNVDENGKPVQKPAPKKSGQYRQRDSREGSRSGSKGGPRNDSR
NSSRNDNNRSFNQPSNKKSSTKQGQQRRGR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacttttaatcatacatta
cgtgaaaatggaattacagaagcaacaccgattcaggagaaggcaattcctgttattatg
tcaggtaaagatattattgggcaggcgaaaacaggaacgggtaaaacgttagcattcgtg
ttaccgattttagaaaaaatcgatccagagtctagtgatgttcaggctttaattgttgca
ccaacaagggaactagcactgcaaattacaactgaaattaaaaaaatgcttgttcaaaga
gaagatattaatgtactagcgatatatggcggacaagatgtagcacaacaattgagaaaa
ttaaaaggtaatacacatattgttgtagcgacaccaggacgattattagatcatatacga
cgtgaaacaattgatttaagtaatctttcaacgattgtactagatgaagcagatcaaatg
ctttatttcggattcttatatgatattgaagatattttagatgagacacctgatagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattggcgaaacgttat
atggaagagccgcaaatgattcaagtacaaagtgaagaagtaacggtagatacaattgag
cagcgtgtcattgagacgacagatcgtgcaaagccagatgcacttcgttttgttatggat
cgtgatcagccatttttagcagttattttctgtcgtacaaaggttagagcaagtaagctt
tatgatgatttaaagggacttggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagctaaaattcagtacttaatcgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcacgtatttaactttgat
atccctgaagatgtagaaagttatattcaccgcattggccgaacaggacgtgcaggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccaatacaaagacaaataatcgaacaaccgatgataaaaaatgta
gatgaaaatggaaaaccggtacaaaagccggctccaaagaaatcaggtcaatatcgtcaa
agagatagccgtgaaggttcaagaagtggttcaaaaggtggtccaagaaacgattcaaga
aatagttctagaaatgataacaatcgatcatttaatcagccaagtaataagaaaagtagt
acaaaacaaggtcagcaaagacgtggccgttaa
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