Bacillus mycoides KBAB4: BcerKBAB4_3656
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Entry
BcerKBAB4_3656 CDS
T00642
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bwe
Bacillus mycoides KBAB4
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwe03032
]
BcerKBAB4_3656
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_3656
Enzymes [BR:
bwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BcerKBAB4_3656
DNA replication proteins [BR:
bwe03032
]
Prokaryotic type
DNA Topoisomerases
BcerKBAB4_3656
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BcerKBAB4_3656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
SAND
Toprim_3
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ABY44827
UniProt:
A9VT71
LinkDB
All DBs
Position
complement(3707073..3709151)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPSKAKTIEKYLGKKYKVVASMGHVRDLPKSQMGIEVKNNFTPKYITIRGK
GPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVDVESDCRVVFNEITKDAIKE
SFKYPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIEREK
EIQSFEPEEFWTIKTEFVKGKDTFEASFYGVDGEKVQLTNEAQVNEIIEKMKDNAFSVEN
VTRKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQLYEGIDLGKQGTVGLITYMR
TDSTRISETAQTEARDYITEAFGAEYIGTEKRKETKKSKAQDAHEAIRPTSVMRKPEELK
SFLSRDQLRLYKLIWERFVASQMASAIMDTVTAKLINNNVQFRASGSVVKFPGFMKVYVE
SKDDGAEEKDKMLPPLEVGETVFSKDIEPKQHYTQPPPRYTEARLVRTLEELGIGRPSTY
VPTLETIQKRGYVALDNKRFVPTELGGIVIELILEFFPEIINIEFTANMEQSLDEVEEGN
ANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCELCSHPMVFKMGKYGKFMACS
NFPECRNTKPIVKEIGVTCPKCDKGQIIERRSNKKKRLFYGCGTYPECDFVSWDKPIGRK
CPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacctcgtaatcgtggagtcgccttctaaggcgaagaccattgaaaaatat
ttagggaaaaaatacaaagtcgtcgcgtccatgggacatgtccgcgatttacctaaaagc
caaatggggatagaagtaaagaataacttcaccccgaagtatattaccattcgtggtaag
ggtcccgttttaaaagatttaaaatcagcggcaaaaaaagcaaagaaagtctatctcgcg
gccgatccggatcgtgaaggagaagcaattgcttggcatttagcaaatacgttaaatgtg
gacgttgaatcagattgccgagttgtatttaatgagattacaaaagatgcaataaaagaa
tcatttaaatatcctcgtgcaattaatatggatttagtagatgcacaacaggcaaggcgt
atactcgatcgtcttgttggttacaatattagtcctttattatggaagaaagtaaaaaaa
ggattaagtgcaggacgcgtacaatctgtagcagttcgtttaatcatcgaacgtgaaaaa
gaaattcaaagttttgaacctgaagaattctggacaattaaaacagaatttgtgaaaggg
aaagacacatttgaagcaagcttttacggtgtagatggtgaaaaagttcaattaacgaac
gaagcacaagtgaacgaaataatcgaaaagatgaaagacaatgcgttttcggttgaaaat
gtaacgcgaaaagagcgaaagcgtaaccctgcattaccgtttacaacatcttccttgcaa
caagaggcagcgcgtaagttaaatatgcgagcaaagaaaacaatgatgcttgcacagcag
ctgtatgaagggatagatcttggaaaacaagggactgtaggtcttattacgtatatgaga
actgattcaacacgtatctcagaaacagctcaaacagaggctcgtgattacattactgag
gcgtttggtgcggaatacataggaacagagaagaggaaagaaacgaaaaagtcgaaagca
caagatgcgcatgaggcgattcgtcctacttcggtaatgagaaagccagaggaactaaaa
agtttcttaagtcgtgatcaactccgtttgtataaactgatttgggagcgatttgttgca
agtcaaatggcatctgctataatggatactgttacagcgaaactcattaataacaatgtt
cagttccgtgcaagtggatcagttgtaaagttcccaggatttatgaaagtgtacgtagag
tcgaaagatgatggtgcggaagaaaaggataagatgttgccaccgttagaagtaggtgaa
actgtattttcaaaagatatagaaccaaagcaacattacacacagcctccgccgcgttac
acagaggctcgtctagtaagaacacttgaagagcttggaattgggagaccgtctacttat
gtaccgacacttgaaacaatccaaaaacgaggatacgttgctttagataataaacgcttc
gttccgactgagcttggtggaatagtaatcgaacttattttagagtttttcccagaaatt
attaacattgaatttactgccaatatggagcaaagccttgatgaagtagaagaaggaaat
gcaaattgggtgaaaattgttgatgatttctacgtaggatttgaaccgcgcttagaaaaa
gcggaaaaagaaatgcgtgaagtggaaattaaagatgaaccagctggggaagactgtgaa
ttatgtagtcacccgatggtctttaaaatgggtaaatatgggaagtttatggcttgttca
aatttcccggaatgtcgtaatacaaaaccgattgtaaaagaaatcggtgttacttgtccg
aagtgtgataaagggcaaattattgaacgccgtagtaataaaaagaaacgccttttctac
ggatgcggtacgtatccagaatgtgactttgtatcttgggataagccgattggtcgtaaa
tgtccgaagtgtgaaggtatgctcgtagagaaaaagttaaaaaaaggcgtgcaagtacaa
tgtatttcgtgtgattatgaagaagaacaacaaatgtga
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