Bacillus mycoides KBAB4: BcerKBAB4_4138
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Entry
BcerKBAB4_4138 CDS
T00642
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bwe
Bacillus mycoides KBAB4
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwe03019
]
BcerKBAB4_4138
03009 Ribosome biogenesis [BR:
bwe03009
]
BcerKBAB4_4138
Enzymes [BR:
bwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BcerKBAB4_4138
Messenger RNA biogenesis [BR:
bwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BcerKBAB4_4138
Ribosome biogenesis [BR:
bwe03009
]
Prokaryotic type
rRNA helicases
BcerKBAB4_4138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ABY45300
UniProt:
A9VHR5
LinkDB
All DBs
Position
complement(4140554..4141864)
Genome browser
AA seq
436 aa
AA seq
DB search
MTLQTFTQYDFKPFLIDAVRELRFTEPTGIQKKIFPVVKKGVSIIGQSQTGSGKTHAYLL
PTLNRIDASREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSI
EKLKKQPHIVVGTPGRIKDLVEEKALFVYKADTIIVDEADLMLDMGFIQDVDKIAARMPK
NLQMLVFSATIPQKLKPFLKKYMENPEHIHINPKQVAAGNIDHYLVPSRHRNKTELVKNM
LLQFKPYLAIVFTNTKKKADEVADGLAERGLKVGRIHGDLSPRDRRKMMKQVRDLEFQYI
VATDLAARGIDIEGISHVINYELPPDLDFFVHRVGRTARAGHSGIAVTIYDPANEEALDS
LEKQRHIEFKHVDLRGDEWADLGDRRRRKSRKKPSDGLDVMATKVVKKPKKVKPNYKRKL
ATERDKVKKKYSNKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacactacaaacttttacacagtatgattttaaaccatttttaatagatgcagttcgt
gaactacgctttacagagccaacaggaattcaaaagaaaattttcccggtcgtgaaaaaa
ggtgtgagtataattggacaatcccaaactggttctgggaaaacacatgcatacttactt
cctacattaaacagaattgatgcaagtcgtgaagaggtacaacttgttattacagcgcct
actcgtgagttagcacaacaaatttacgaagaaattgtgaaactaacaaagttctgtgca
gaagatcaaatgattacagcacgctgtttaattggtggaactgataaacaacgatcaatt
gaaaagttgaaaaaacaacctcatattgtagttggaacgccaggacgtattaaagattta
gtagaagaaaaggcgctatttgtttataaagcggatactattattgtcgatgaagcggac
ttaatgcttgatatgggattcattcaagatgtagataaaattgcggcacgtatgcctaaa
aatctgcaaatgttagttttctctgcaacaattcctcaaaaattaaaaccatttttgaag
aaatatatggagaatccagaacatattcatattaatccgaagcaagttgcagcaggaaat
attgatcattaccttgtgccttcaagacaccgtaataaaactgaattagtgaaaaatatg
ctacttcaatttaaaccatatttagcaattgtctttacaaacacaaagaagaaggctgac
gaagtagccgatggattagcagaacgtggattaaaagtagggcgtatacacggtgattta
tcaccacgtgatcgtagaaaaatgatgaaacaagttcgtgatttagagttccaatacatt
gtcgcaacagatttggcggcacgtggtattgatattgaaggaattagccatgttattaac
tatgaacttccaccagatttagatttcttcgttcaccgtgttggaagaactgcacgtgcg
ggtcattcaggtattgcagtgacgatttatgatccagcaaatgaagaagcgttagatagt
ttggaaaaacaacgtcatatcgagtttaaacatgtagatttacgcggagatgaatgggcg
gatttaggtgaccgtcgtcgtcgtaagagccgtaaaaaaccaagtgatggactagatgtt
atggcaacaaaagttgttaagaagccgaaaaaagtaaaaccaaactataaacgaaaactt
gcaacagaacgtgacaaagtgaagaaaaaatatagcaataaaaaaagataa
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