Bacillus mycoides KBAB4: BcerKBAB4_4161
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Entry
BcerKBAB4_4161 CDS
T00642
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
bwe
Bacillus mycoides KBAB4
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bwe03016
]
BcerKBAB4_4161
Enzymes [BR:
bwe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
BcerKBAB4_4161
Transfer RNA biogenesis [BR:
bwe03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
BcerKBAB4_4161
Prokaryotic type
Methylthiotransferases
BcerKBAB4_4161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABY45322
UniProt:
A9VHT7
LinkDB
All DBs
Position
complement(4161602..4162954)
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AA seq
450 aa
AA seq
DB search
MATVAFHTLGCKVNHYETEAIWQLFKQGGYERTEYEKKSDVYVINTCTVTNTGDKKSRQV
IRRAVRQNPDAVICVTGCYAQTSPAEIMAIPGVDIVVGTQDREKMLGYIEEFRKERQPIN
AVRNIMKTRVYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDGKEVIKQ
AQQLVDAGYKEIVLTGIHTGGYGEDIKEYNLAGLLRDMEAEVGGLKRLRISSIEASQISD
EVIEVLDKSEVVVRHLHIPLQSGSNTVLKRMRRKYTMEFFQERLDRLKEALPGLAITSDV
IVGFPGETEEEFMETYNFIKENRFSELHVFPYSKRTGTPAARMEDQVPEDVKNDRVHRLI
ELSNQLAKEYASRFEGEVLEIIPEETFKDGDREGLYVGYTDNYLKIVFEGSEELIGKLVK
VKITKAGYPYNEAQFVRVLEDDVKKESASA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgttgcgttccacacgttaggttgtaaagtaaaccactatgaaacagaagcg
atttggcaattgtttaaacaaggtggttatgaaagaactgaatatgaaaaaaaatctgat
gtatacgttattaacacatgtacagtaacgaatactggagataaaaaaagccgtcaagta
attagacgtgctgtacgccaaaatccagatgcggtaatttgtgtaactggatgttatgca
caaacatctccagcggaaattatggcaattccaggtgtagatattgttgttggtacgcaa
gatcgtgagaagatgttaggatacatcgaagaattccgtaaagagcgtcaaccgattaat
gctgtccgtaatattatgaaaacacgtgtatatgaagagctcgatgtaccatatttcacg
gaccgtacacgtgcatctttaaaaatacaagaaggttgtaataacttctgtacattttgc
atcattccttgggcgcgtggtttaatgcgttctcgtgatggaaaagaagttattaaacaa
gcgcagcaattagtagatgctggctataaagaaatcgtattaacaggtattcatacaggt
gggtacggcgaagatataaaagagtataacttagctggattactgcgcgatatggaagcg
gaagtaggcggattgaaacgccttcgtatttcttctattgaggcgagtcaaatttctgat
gaagtaattgaagtgttagataaatcagaagtagttgtacgtcacttgcatattccatta
cagtcaggatctaatactgtattgaaacgtatgcgccgtaagtatacgatggaatttttc
caagagcgtttagatcgtttgaaagaagcgttaccaggtcttgcgattacatcagacgta
attgttggattcccaggtgaaacagaagaggaattcatggaaacgtacaatttcattaaa
gagaatcgtttctctgaattacacgttttcccttattcgaaacgtacaggtactccagca
gcacgtatggaagatcaagttcctgaagacgtgaagaacgatcgtgttcaccgtctaatt
gagctatcaaatcaattagcgaaagagtatgcttctagatttgaaggtgaagtacttgaa
atcattccggaagagacatttaaagatggtgaccgtgaaggtttatatgtaggttataca
gataactacttaaaaattgtgtttgaaggatctgaagaattgattggtaagctagtaaaa
gtgaaaattacaaaagctggttatccatataacgaagcgcagtttgttcgtgttcttgaa
gatgatgtaaaaaaagaatcagcaagcgcataa
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