Candidatus Bandiella euplotis: Bandiella_00120
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Entry
Bandiella_00120 CDS
T09675
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bwf
Candidatus Bandiella euplotis
Brite
KEGG Orthology (KO) [BR:
bwf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bwf03016
]
Bandiella_00120
Enzymes [BR:
bwf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Bandiella_00120
Transfer RNA biogenesis [BR:
bwf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bandiella_00120
Prokaryotic type
Bandiella_00120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Plasmid_RAQPRD
DUF5442
Motif
Other DBs
NCBI-ProteinID:
WPX96017
UniProt:
A0ABZ0UKL0
LinkDB
All DBs
Position
99517..100293
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AA seq
258 aa
AA seq
DB search
MPRYKLVIEYDGTNFHGWQSQKNAITIQGELEIAISNLLKIEVKVQGASRTDSGVHAYGQ
VAHFDVEKSYDIYRMQNGINYYLRPHKICIVAIEKVDDEFHARFSAKHKQYVYQIINRTA
PTVLFENKAWHIKEQLNIYKMQEAAGHLIGTHDFSSFRATGCQAQSPIKTLDSVQIEKVD
DQISIKLTAKSFLYNQVRIMVGTLRDFGQEKWSPSHMKAILESKTRALAGQTAPSHGLHL
KKIDYLHSPLIISQTISN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgccaagatataaactagtcattgaatatgacggcacaaacttccacggttggcaaagc
caaaaaaatgcaatcaccatccaaggagaacttgaaattgcaatatccaacttgttaaaa
attgaggtgaaagtgcaaggggccagcaggacagactctggagttcatgcttatggccaa
gttgcgcactttgatgtcgaaaaaagttacgatatttatagaatgcaaaatggaataaat
tattatctaagaccccataaaatctgtattgttgcgattgaaaaagtggatgatgagttc
cacgccagattttccgccaagcataaacagtatgtgtaccaaatcattaatagaacagcc
ccaacagtgctttttgaaaacaaagcttggcatatcaaagaacaactaaacatatacaaa
atgcaagaagcagctgggcatttgattggcacccatgacttctccagctttcgagcaacc
ggatgtcaggcccaatcaccaattaaaacacttgattctgtacaaatagagaaagtggac
gatcagatcagcataaaactgactgcgaagtcttttttgtataatcaggtgaggattatg
gtcggcacactgcgagattttggccaagagaaatggtcgccttcgcatatgaaggctata
ttagaaagcaaaacaagagcgttggccggccaaaccgcaccaagccatggattacaccta
aaaaaaattgattacttgcactcgccacttatcatttcccaaaccatttcaaactga
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