Candidatus Bandiella euplotis: Bandiella_00330
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Entry
Bandiella_00330 CDS
T09675
Name
(GenBank) DNA helicase II-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bwf
Candidatus Bandiella euplotis
Pathway
bwf03420
Nucleotide excision repair
bwf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bwf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bandiella_00330
03430 Mismatch repair
Bandiella_00330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bwf03400
]
Bandiella_00330
Enzymes [BR:
bwf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bandiella_00330
DNA repair and recombination proteins [BR:
bwf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bandiella_00330
MMR (mismatch excision repair)
Other MMR factors
Bandiella_00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_11
AAA_12
PcrA_UvrD_tudor
RbcX
ABC2_membrane_3
ResIII
Motif
Other DBs
NCBI-ProteinID:
WPX96221
UniProt:
A0ABZ0UJD9
LinkDB
All DBs
Position
complement(249785..251929)
Genome browser
AA seq
714 aa
AA seq
DB search
MDDTKEYLSGLNESQLEAVTHVEGPLLILAGAGTGKTRVLTSRIINIVDNAHAFPSQILA
VTFTNKAASEMRQRVEKYLGDVMGSMNIGTFHSIAAKILRKHAELLGYKSDYTIINQDDQ
IRLIKQIVKDFGFDEKDVPAKLLLYYINRFKDRAILPENVASNDIGHFANNKIKQLYHEY
QDRLKNFNAMDFGDLLLNNITLFNTHLDICLLYQNKFKYMLVDEYQDTNIAQYMWLRILS
QNNNNICCVGDDDQSIYAWRGAEISNILRFDKDYKDAKVIRLERNYRSTQHILNIASKLI
ANNTMRHFKELWTERTDGDMVKVVNYYDDKEEARAIADEIDMLERMKKCSLSDIAVLVRA
GYQTRNFEESLNFLGIPYRIIGSTKFYDRTEVKDGVAYIRLLINHDDNLAFERIINVPKR
GVGPSTLQNIIQLSKENGISYFAATKMLVQQKKSKSKAMDSLADFINHIETSNHQLKHTE
HRKVVEELMEKTSYLEMYRKEDKEDAKDRFGNIKELVRSLEEYESLNDFLQYITLVNDAD
NVAEDNRVNIMTMHAAKGLEFDTVFLPGWEEGVFPSSKSIEEDRENGLEEERRLAYVAIT
RAKRNLTISYACYRRVYGDFQASEISRFINELPKNAYQLINNYFNNTYKQNNNHPVIKIN
KARSIEHAKFGVGEKVEHVTFGKGVVLSADGNVRQVFFEKTGVKKIMVEFLKIV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacaaaagaatacttatcaggacttaacgaaagccaattagaagccgtcact
catgttgagggaccactccttattttagcaggtgcagggacaggaaaaacaagggttctt
acctcaaggattatcaatattgttgataatgcgcacgcctttccatcccaaattcttgct
gtaacttttacaaataaagctgcaagtgagatgagacaacgggttgaaaagtatttaggt
gacgtaatgggttcaatgaatataggtacattccattcaattgctgcaaaaattcttaga
aaacacgcagagcttcttggctataaaagtgattataccatcataaaccaggatgatcag
ataaggctcataaaacaaatagttaaagactttggatttgacgaaaaagatgttccagca
aaacttttactttactatatcaatcgatttaaagatagagcaatcttaccagagaatgtt
gcatccaatgatataggacactttgcaaataataaaatcaaacaactataccatgaatat
caagataggctaaaaaatttcaatgcaatggattttggcgacctacttttgaataatata
accctttttaacacacatttggatatctgcctactttatcaaaacaaattcaagtatatg
ttggtagacgaataccaagataccaacatagctcagtatatgtggcttagaatattatcc
caaaacaataacaatatatgttgcgttggggatgacgaccaatctatatatgcttggcga
ggagctgagattagtaatatattgcgttttgataaagattataaagacgctaaagtaata
agattagaaagaaactacagatcaacccaacatatattgaatatagccagtaaattaatt
gccaataatacaatgcggcattttaaagagctgtggactgaaagaacagatggagatatg
gttaaggtggttaattattatgacgacaaagaagaagcaagagcgatagcagatgaaatt
gacatgctagaaagaatgaagaagtgttctttatctgacatagcagtacttgtaagagct
ggatatcaaacaagaaatttcgaagaaagtctgaattttttagggataccttatagaatc
ataggtagcacaaaattttatgacagaacagaggtaaaagacggcgtggcatacattcgc
ctccttataaaccacgatgataatttagcatttgaaagaatcattaacgtaccaaaaagg
ggggtgggaccaagtacattacaaaatataatccaactttcaaaggaaaatggcatttca
tattttgccgcaaccaaaatgcttgtccaacagaaaaaatccaaaagtaaggcgatggat
agtttggctgatttcataaatcacatagaaacaagtaatcatcagctaaaacacactgaa
catcgtaaagtagttgaagagctaatggaaaaaaccagttatttagaaatgtatagaaaa
gaggataaagaggatgcaaaggatagatttggcaacataaaagaactggttagaagcctg
gaagaatacgagagtctgaatgattttttacagtatataactcttgtaaatgatgctgat
aatgtggcagaagacaatagggttaacatcatgaccatgcacgccgcaaaaggactggaa
tttgatactgtatttttaccaggatgggaggaaggagtttttccaagttcaaaatcaatc
gaagaagacagagaaaacgggttggaagaagaaaggagattagcgtatgttgcaattaca
agggcaaaacgcaatttaacaatttcatatgcctgttacagaagggtatatggtgatttt
caagcttcagaaatctccagatttattaacgaattgccaaaaaacgcatatcaacttatt
aataactacttcaacaatacatataagcaaaataataatcaccctgtaataaaaataaat
aaagcacgctcaattgagcatgccaaatttggcgtgggggaaaaagttgaacatgtaacc
tttggcaaaggagtggttttatctgcagatggaaacgtaagacaagttttttttgaaaaa
actggcgttaaaaagattatggtagaatttttaaagatagtataa
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