Candidatus Bandiella euplotis: Bandiella_00405
Help
Entry
Bandiella_00405 CDS
T09675
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bwf
Candidatus Bandiella euplotis
Pathway
bwf03030
DNA replication
bwf03430
Mismatch repair
bwf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bwf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bandiella_00405
03430 Mismatch repair
Bandiella_00405
03440 Homologous recombination
Bandiella_00405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwf03032
]
Bandiella_00405
03400 DNA repair and recombination proteins [BR:
bwf03400
]
Bandiella_00405
Enzymes [BR:
bwf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bandiella_00405
DNA replication proteins [BR:
bwf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bandiella_00405
DNA repair and recombination proteins [BR:
bwf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bandiella_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF2202
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
WPX96296
UniProt:
A0ABZ0UJL0
LinkDB
All DBs
Position
complement(307457..310840)
Genome browser
AA seq
1127 aa
AA seq
DB search
MSNYINLRTYSDYSIGKSVIKVQDLAEHCFKSHIPAVALTDFNNLFGSLEFSLECQKKGV
QPIIGSVLTLNYGNEKEQYANILLIAKTREGYENLMKLVSNCYLGNTDHTTPPHVLLEDI
FENSKGLIALCGSNNSPMEQLFYADKHEAAKDLVNLLLENFQDNLFLELTRTENHEHQYE
FEKFLATVALEKSIPIVATNPAQYINQTMQDALDALICITEGRYLIEDDRNKAGSESYFK
SKRQMEELFSDVPEAVRNTELIAKKCSFLLKESKPLLPKFLNSNQDEAEELKQQATKGLK
LRLASTNFNEDTQKKYFDRLEFELAVINKMDFGGYFLIVADFIQWSKKNGIPVGPGRGSG
VGSIVAWSLQISDMDPIKFGLLFERFLNPDRVSMPDFDIDFCQDRRDEVIEYVRKKFGSD
KVAHIITFGKLQARAVLRDVGRVLQIPYMQVDSICKMVPNNPANPVSLKEAIDMDKELKA
QSKSDPSLEKLISISLKLEGVNRHISTHAAGVVIADKELTKVIALYKDANSSMPVVQYSL
KYAEKIGLVKFDFLGLKTLTVISWTCKLIKASGINLDFNKIALDDAKTYQMLANGDCIGV
FQFESSGMRESIKKTEPDNIDDLVALGSLYRPGPMDNIPSYINRKHGREKIDYIHPLLEP
VLKETYGIIVYQEQVMEIARVLAGYSLGEADLLRRAMGKKIKEEMEAQRNKFVQGCINNC
IKNYEAEEIFNLVNKFASYGFNKSHAVAYAYISYQTAYLKANFPLEFLTASINLEIDNTD
KIYIFLMEAKKFGITILLPDINYSKAEFTIKNGKLRFGLAGLKGVGKKIMDLITEEREKR
GRFKDIFDFVERLAEVGINKKVLENLIKSGAFDDFNVGRLTLLMNIELLLKQSSVVNKNE
DQLDLFFDSNSSVRFKPKLEEFNEWNEKERMQAEFESFGYYLTAHPLEKYQIILQKLGIT
EACEIDEIENQLSKIKLAGVLLSKKVRSTARGKYAFLQISDLKGIIDLSIFNEDLLYKTI
DLLKEGNTLYFKAEVRKDAAGIRIIAEDVQEVRQAILDSDIRLNIVIKNKNQLDFLRDKI
NNDDGVKISLMAELESGDVVDFKHNSPLLIDIIELEKLIQNGIKVNI
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactacatcaatctccgcacatactctgattactctataggaaaaagtgttatc
aaagttcaggaccttgcggagcattgctttaaaagccatataccagcagttgctcttacg
gattttaataatttgtttggatcattagagttttcgttggaatgccaaaaaaagggagtt
caacccatcataggttcagtattaactctcaattatggtaatgaaaaggaacaatacgca
aacattttactgatagccaaaaccagggaaggatatgaaaacctaatgaaattagtaagc
aactgctacttgggtaatacggatcatacaactcccccacatgttttactggaggatatt
tttgaaaattcaaaaggactgatagcgctatgcggaagcaataattctccgatggaacaa
cttttttacgcagataaacatgaagcagccaaagatttggttaacttattattggaaaat
tttcaagataacttattcttagaactaaccagaacggagaaccatgaacatcaatatgaa
tttgagaaatttttggccacagtcgcactggaaaaatccattccaattgttgcaaccaat
cctgcccaatacattaaccaaacaatgcaagatgcacttgatgccctaatatgcattaca
gaaggaaggtacctaattgaggatgatcgcaacaaagcagggagtgagtcttattttaaa
agcaaaagacagatggaagagctgttttcagatgtcccagaggcagtacgaaatacagag
ttaattgcaaaaaaatgttcttttctattaaaagaaagtaaaccactccttccaaaattt
ttaaactccaatcaagatgaagcagaggaactgaaacaacaggcaaccaaagggctgaag
ttaagattggcaagcacaaattttaacgaagatacgcaaaaaaagtattttgacagactg
gagtttgagttggcggttatcaacaagatggattttggtggatactttctgatcgttgct
gactttatacaatggagtaaaaaaaatggcatacctgttgggcctggtcgtggttctggg
gttggctctatcgttgcttggagtttacagattagcgatatggacccaataaaatttggc
cttctttttgagagatttttaaatccagacagagtatctatgcctgattttgatatagat
ttctgccaggatagaagagatgaggtaattgagtatgtaaggaaaaaatttggaagtgac
aaagtggcccatatcatcacttttggaaaactgcaagcaagggcagtacttagagacgtt
ggaagagtacttcagataccatacatgcaagttgacagcatctgtaaaatggtaccaaat
aacccagccaatccagtcagccttaaagaggcaattgatatggataaggaattaaaagca
caaagcaaaagtgatccaagtttggaaaagctaatatctattagtttaaagttagaaggt
gtaaacagacatatctccacccatgctgctggcgttgttattgctgataaagagctaacc
aaagttattgcgctttataaagatgcaaattccagtatgccggttgtgcaatattcatta
aaatatgcagaaaaaatcgggctggtaaagtttgactttttggggttaaaaactttaaca
gtaatttcttggacttgtaaattgatcaaagccagcggtattaacttggattttaataag
atcgctttggatgatgctaaaacttatcagatgttggcaaacggagattgtatcggcgta
tttcagtttgaaagctccggtatgagagaaagcatcaaaaaaactgaaccagataacatc
gatgacttagtagctttgggctctctttacagacctgggccaatggataatataccaagt
tatattaatcgaaaacatggcagagaaaagatcgattatatacatccacttcttgaacca
gtactgaaggaaacatacgggattattgtgtatcaagaacaagtaatggagatagccaga
gtattagctggatattcactaggagaagcagatttgctaagaagagcaatgggcaaaaaa
atcaaagaggagatggaagctcaaagaaataagtttgtccagggttgcataaataactgc
attaaaaactatgaagctgaagagattttcaaccttgtaaataaatttgcaagctatgga
tttaacaaatcccatgctgtggcttatgcatatatctcatatcaaacagcttatttaaaa
gctaattttccattagaatttttaactgcttctatcaatttagagatagataacactgat
aaaatatacatattcctaatggaggcgaagaaattcggtatcacaattttactgcctgat
attaattactctaaagcggagttcacaataaaaaatgggaagctaaggtttggacttgca
ggtcttaaaggcgttggaaaaaagataatggatttaattacggaggaaagagaaaaaaga
gggagattcaaagatatattcgattttgtcgaaagattagccgaagttggaatcaataaa
aaagtccttgaaaatcttataaaatcaggagcttttgatgattttaacgttggaagactt
acattgttgatgaatatagagttgctgcttaagcaaagcagtgtagtgaataaaaatgag
gatcaactagacctattttttgactccaacagtagtgtgaggtttaagccaaaattagag
gaattcaacgagtggaatgaaaaagagaggatgcaagctgagtttgaatcttttggatat
tatttaactgctcatccacttgaaaagtaccagattatattacaaaaattaggcatcaca
gaagcatgcgaaatagatgaaattgaaaatcagctatcaaaaataaaactggcaggcgtt
ttgttatcaaaaaaagtgcgttcaacagcaagaggtaagtacgccttcttacagatttca
gatctaaaaggaattattgacttatccatttttaacgaagatttgctttataaaaccatt
gatcttttaaaagaagggaacaccctttattttaaagctgaggtaaggaaggatgcagct
gggatcagaattatagctgaagacgttcaagaggttagacaagcaattttggattcagac
atacgtcttaacatcgtgataaaaaacaaaaatcaattagattttctaagggataaaata
aataatgatgatggtgttaagataagtttaatggccgagttggagtcaggcgatgttgtg
gattttaaacataacagtcctttgttgatcgacataattgagttagaaaaattaattcaa
aatggaattaaggtgaacatatga
DBGET
integrated database retrieval system
