Candidatus Bandiella euplotis: Bandiella_01136
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Entry
Bandiella_01136 CDS
T09675
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bwf
Candidatus Bandiella euplotis
Pathway
bwf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bandiella_01136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwf03019
]
Bandiella_01136
03016 Transfer RNA biogenesis [BR:
bwf03016
]
Bandiella_01136
Enzymes [BR:
bwf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bandiella_01136
Messenger RNA biogenesis [BR:
bwf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bandiella_01136
Transfer RNA biogenesis [BR:
bwf03016
]
Prokaryotic type
tRNA degradation factors
Bandiella_01136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
KH_NusA_1st
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WPX96997
UniProt:
A0ABZ0UMQ3
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All DBs
Position
complement(830889..833171)
Genome browser
AA seq
760 aa
AA seq
DB search
MFNIVSKSIEWGGKRIELETGKIARQADAAVMVRMGSSVVLCTVTYNKKIKEGIDFFPLT
VHYLEKYYAAGKLPGGFMKREGKPSDREVLISRLIDRPIRPLFPEDFFHEVNVICKVLSY
DDNAPTDVLAIIGTAAALQISEVPFTNALAAIKVGIVDGEFTINPSSLDLEKSDLDLVIA
GTKDSVLMIESSAKEISEEKLISAIEFGHNNIQPIIDLINDFASVAGKSKYDYVKFSISN
VYEVLKQEFQNDVKDVYKIVNKKERNEQLKGIYETALQKHAQNENFEQNVFDMAFKKLQK
EVVRTKILDQNVRIDGRNLEDIRNIECEVGLLPQPHGSALFTRGETQALAVVTLGSMQDS
QLRDDITGVSSDRFLLHYNFPPYSVGEVGMLRPPGRREIGHGKLAHKAILSILPNIDAFP
YTIRIVNEITESNGSSSMATVCASVLSLMDTGVPIKTPVAGIAMGLILEQDRFAILSDIL
GDEDALGDMDFKVACTKNGVTALQMDIKVRGITIEIMKQAVAQARKGCDHIMGKMLKVIS
QPNANLSSSAPRIVSININKEKIGAIIGPGGKIIKDICEKSGAKVDIEDDGKVSVFAKDE
ASLIIAKKMITDIVAEPERGEVYTATVVKIMPFGIFARFLGSAEGLVHISEILDRKIDTL
ENVLSEGEFVNVKYLGVDNRGKFKLTMKDVKQSDELINKAAWKKLLEGPTKKHTAEKEDK
KVNPEMKSKEVPAPSPEKKGDLEKEPSSEKSFIRKILEDF
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacatagtgagcaaatccatagaatggggtggcaaaaggatagagttagaaaca
ggcaaaatcgcaagacaagctgacgccgcagtaatggtacggatggggagcagcgttgtc
ctttgcaccgttacttataacaagaaaataaaggaagggattgatttctttcctctcacc
gttcactatttagaaaagtattacgccgctggcaaattacctggtggattcatgaagaga
gaagggaagccgtctgatagagaagttttaatttcaaggctcatagacaggccgatcaga
cctttgtttcccgaggattttttccacgaagtcaatgtgatatgtaaggtgctgtcctat
gatgataatgcgccaactgatgtacttgcaataataggaacagctgctgcactacaaatc
tcagaagtgccgttcactaatgcgttagcagcaattaaggttggcatagtagatggagag
tttactattaacccatcctcactagatttagagaaatctgatctggatttagtgattgca
ggaacaaaggattctgtcttaatgattgagtcatcagcaaaagaaattagtgaggaaaag
ctaatctcggctatagaattcggacataataatattcagccaatcattgatttgatcaac
gatttcgcatctgttgcaggaaaaagtaaatatgattacgttaagttcagcatctctaac
gtttatgaagtcttgaagcaagaatttcaaaatgatgtaaaagacgtatataaaatagtc
aataaaaaagagaggaatgaacaactaaaaggtatctatgaaacggcccttcaaaagcat
gcacaaaatgaaaattttgagcaaaatgtttttgacatggcatttaaaaagcttcaaaaa
gaggtggttagaactaaaattttggatcaaaatgtcaggattgatggcagaaacctagaa
gatatcagaaacatagaatgtgaagttggtttgttaccacaaccacatggttctgcgtta
tttacaagaggagaaacacaagcattagccgtagtgactttaggcagcatgcaagactct
cagttaagggatgatataactggtgtctcttctgacagatttttgctgcattacaacttt
ccaccttactctgtgggggaagttggaatgttgagaccaccaggcagaagagaaataggc
catggtaagttagcccacaaagccatattatccatacttcctaacatcgacgctttcccc
tatacaatacgtatagtgaacgagattacggaatccaatggctcgtcctcaatggcaact
gtttgcgcttccgtactgtctttaatggacacaggagtgccaattaaaacacctgtagca
gggattgctatgggattaattttagaacaggataggtttgcaattctgtcggatatatta
ggagatgaagatgctcttggtgatatggatttcaaagtggcatgcacaaaaaatggtgtt
acagcactacaaatggacataaaagtacgtgggatcaccatagagattatgaagcaagca
gttgcccaggcaagaaagggttgtgatcacataatgggcaagatgttaaaagtgatttca
cagccaaatgccaacttgagctcatctgctcctaggattgtatcaattaacataaataag
gaaaaaataggggcaatcatcggaccaggcgggaaaattataaaagatatctgcgaaaaa
agtggagcaaaggttgatatagaggatgatggcaaagtatctgtttttgctaaggatgag
gcatctttaattattgcaaaaaaaatgatcaccgacatagtagcagaaccagaaagaggt
gaggtctatacagcaacggttgtaaaaattatgccgtttggtatttttgcaaggtttttg
ggtagtgcagaggggcttgttcatataagcgagattttagacagaaaaatagatacatta
gaaaatgttttatctgaaggtgaatttgtcaacgtaaaatatctaggcgtcgacaataga
ggaaagtttaagcttacaatgaaggatgtcaaacaaagcgatgaacttatcaacaaggcc
gcttggaaaaagttgctggaaggacctacgaaaaaacatacggcagaaaaggaagacaaa
aaggttaaccctgaaatgaaaagcaaagaagtacccgctccaagccctgagaaaaaaggc
gacttagagaaggaacctagttctgaaaaaagctttatacggaaaattttagaggacttt
taa
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