Candidatus Bandiella euplotis: Bandiella_01138
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Entry
Bandiella_01138 CDS
T09675
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bwf
Candidatus Bandiella euplotis
Brite
KEGG Orthology (KO) [BR:
bwf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bwf03016
]
Bandiella_01138
Enzymes [BR:
bwf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bandiella_01138
Transfer RNA biogenesis [BR:
bwf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bandiella_01138
Prokaryotic type
Bandiella_01138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WPX96999
UniProt:
A0ABZ0ULI5
LinkDB
All DBs
Position
complement(833459..834334)
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AA seq
291 aa
AA seq
DB search
MDGWLLIDKPTNLSSFQTINRFKRILNTKVGHCGTLDPFASGFLLMAVGKATRLVEYAMA
LEKDYTFRVKWGISTDSDDLTGDVKETCSHIPTQKDIEEKLNDFIGKIEQVPPIFSAVKV
NGRRAYDYARNGDDISLKPKLVTLKKFSVLAHNKNETSFHVVCGKGFYIRSLARDLAESL
GTLAHVTTLRRNLSGIFQNKEMVSSEKEKDFLHPSEFYDYLSSRILPLDYVLDDIPVYNS
EQACVSKLKNGQTIVCLDSFKSNSTVAAKSDGVLIALCTFLDGYLKPIKTF
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatggatggcttttaatagacaaacccacaaacctatcatcttttcaaaccatcaac
cgtttcaaaagaatattaaataccaaagtgggtcattgcggaacccttgaccctttcgca
tctggctttcttctaatggcagttgggaaagcaaccagactggtcgagtatgctatggca
ctcgaaaaagactatacttttagggtaaaatgggggatttcaacagatagcgatgatttg
acgggggatgttaaagaaacttgcagccacatcccaacacaaaaggatatagaggagaag
ttaaatgacttcattggcaaaatagaacaagtcccaccaatcttttcagcagttaaagtc
aatggaagaagagcttatgattacgcaagaaatggtgatgatatctctttaaaaccaaaa
ttagttacgctcaaaaaattctctgttctagcgcataataaaaacgaaacttcttttcat
gtggtctgtggtaaaggattttatattaggtcgcttgcaagagatttggctgaatcttta
ggtacattggctcatgtgacaacactaaggagaaatctaagcggcatatttcaaaacaaa
gagatggttagcagcgaaaaagaaaaagatttcttgcatccaagtgaattttatgattat
ctatcgtcaagaattttgcctctggattatgtgctagacgacatccctgtttataattca
gagcaagcttgcgttagtaaattaaaaaatggtcaaactatcgtctgcttagattcgttt
aaaagtaactctacggtagcagcaaaaagtgatggcgtacttatcgctctttgtactttc
ttagacggttacttaaaaccaataaaaactttttaa
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