Candidatus Bandiella euplotis: Bandiella_01495
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Entry
Bandiella_01495 CDS
T09675
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bwf
Candidatus Bandiella euplotis
Pathway
bwf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bandiella_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bwf03021
]
Bandiella_01495
03019 Messenger RNA biogenesis [BR:
bwf03019
]
Bandiella_01495
Transcription machinery [BR:
bwf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bandiella_01495
Messenger RNA biogenesis [BR:
bwf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bandiella_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
AAA
NACHT
DnaB_C
NB-ARC
OB_RNB
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WPX97346
UniProt:
A0ABZ0UMH6
LinkDB
All DBs
Position
complement(1097430..1098953)
Genome browser
AA seq
507 aa
AA seq
DB search
MKKVNGTLGAIDSEDNFGSVKDAQEKTDKSVKKLSYRLKVDHKAKPSDEKSIQERVEDKD
YNHRHLDSKNNAEQNKIARETLNLSDFKNKSPDELVLLAESLDLKNPNSLNRHDLVFAIL
KDYAEKGVDIVGEGVLEILPDGYGFLRSAKSNYIPCSNDVYVSPNQIRRFGLRTGDTITG
LIRAPKKDERYFAIVNVQTINYQSTESSKHRIHFEDLTPLYPEDRISLEFLDGSKSTLSG
RIIDIVSPLGKGQRALVVAPPRTGKTVLMQNIAHAVAKNYPEIYLIVLSVGERPEEVTDM
LRSVKGEVVSSTFDEPSHRHVQLAEIVIEKAKRLVEAKKDVVVLLDSITRLARAYNDVAP
SSGKVLSGGVDSNALQRPKKFFGAARNIEGGGSLTIIATALIETGSRMDEVIFEEFKGTG
NAEIILDRKIADKRVFPAIDITKSGTRKEELIVDKGNLSKAWVLRKILSPMSSTEAIEFL
INKLKYSQSNYDFFEQMNTYSPSKKQD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggtaaatggcacattaggtgctatagattcagaggataattttggcagcgta
aaagatgctcaagagaaaacggataaaagtgtgaaaaagcttagctacaggttaaaagtg
gatcataaagccaaacctagtgatgaaaaatccattcaagagagagtggaagataaagac
tataatcatcgtcacttagattccaaaaacaatgcagaacaaaataaaatagctagagaa
accttaaatttaagtgactttaaaaacaagtctccagatgagcttgtattgcttgcagaa
tctctagaccttaaaaatccaaacagtctaaaccgtcatgatttggtattcgccattttg
aaagattatgccgaaaagggggtggatatagtaggagaaggtgtgttagaaatattgccg
gatggttatgggtttttaagatctgccaaatcaaactatatcccatgctctaatgatgtt
tatgtgtcccccaaccaaattagaaggtttggtctaagaaccggtgatactataactggt
ctgattagagctccaaaaaaagatgaaaggtattttgcaattgtaaatgtccaaacaatc
aactatcaatcaacagaaagtagtaaacacagaatacatttcgaagatttaacccctctt
tatccagaagacagaataagcttggaatttttagacggaagcaaaagtacattaagtgga
cgcattattgacatagtatcccctttaggcaaaggacaaagagcattggttgttgcgcct
cctagaaccgggaagacggttttaatgcaaaacattgcacatgccgtagccaaaaactat
ccagagatatacctgatagttttatccgtaggagaaaggccagaggaagttacagacatg
cttaggtcggttaagggtgaagtagtaagttcaacgtttgacgagccatcgcatcgtcat
gtacagttagctgagatagttatagaaaaagcaaaaaggctggttgaagcgaaaaaagat
gttgtcgtgttactagactctataactaggctggcaagggcatacaacgatgtagcgcct
tcttcaggtaaagtactaagcgggggcgttgattctaacgcgctacaaagaccaaaaaaa
ttctttggggcggcaaggaacatagagggtggtggttctcttaccattattgctactgca
ttaattgaaactggttctagaatggacgaagtaatattcgaagaatttaaaggaaccggt
aatgcagagatcatactggacagaaagatagctgataaaagggttttccccgcgattgat
ataactaaatctggaactagaaaagaagaattaatagtagataaaggaaacctaagtaaa
gcatgggttttaagaaaaatattaagccctatgagttcaacagaagcgatagaattttta
attaataagttgaaatattcacaaagtaattatgatttcttcgagcaaatgaacacttat
agcccaagcaagaagcaagactaa
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