Bacillus weihaiensis: A9C19_10815
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Entry
A9C19_10815 CDS
T04822
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bwh
Bacillus weihaiensis
Pathway
bwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9C19_10815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwh03019
]
A9C19_10815
Messenger RNA biogenesis [BR:
bwh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A9C19_10815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
APH05202
UniProt:
A0A1L3MS67
LinkDB
All DBs
Position
complement(2287613..2289274)
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AA seq
553 aa
AA seq
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MEKTEKIKLIALGGVGEVGKNMFVVEINSDIFVVDSGLMYPEDEMLGIDMVIPDITYLKE
NRERVKGIFLTHGHDESIGGIFNLLHHIQVPIYGTKLTLALVGEKLKENRMKQTVLVKEI
TNETVLNFEHTEVTFFRTNHSIPDSVGISFATTMGAIVHTGDFKFDQTPVGENFSDVGKI
ATIGDKGVLCLLSDSINAEKPGHSGSEAIVGEEISDVMYNAEGRVIVAVYASNLHRIQQV
INAAVKNNRKLAVVGKNMRNILNLAISLGYIDVEDELFISINEINNFGSKEVAILTTSNH
GEPLAVLSRMAKQSHKQVNILKGDTILISATPIPGNELVFSRTIDLLCRAGANVVFGQKQ
VHVSGHGHQEELKMMLNLTKPKYFIPVHGEFKMQKAHAKLAQQVGLSEKNIFLVDKGEVV
EFKGEAVYTGGKVPSGNVLIDGLGIGDVGNIVLRDRRLLSQDGILIVVVTLDKKRKKITS
GPEIITRGFVYVRESEQLITQATKVVSDIVEKSMNEQSIEWSAIKLNIREALNQFLYEKT
KRRPMILPIIMEI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacagaaaaaattaaattaatcgctttaggcggtgttggagaagtcggtaaa
aacatgtttgttgttgaaattaattcagatatatttgtcgttgattctggattaatgtat
cccgaggatgaaatgcttggaatagatatggttattcccgatattacttatttaaaagaa
aatagagaacgtgtaaaggggattttccttacacatggtcatgatgaaagcattggtggt
atttttaatttacttcaccatattcaagttccaatctatgggacaaagttaacattagca
ttggtaggagaaaagctgaaagaaaatcgaatgaaacaaacagtacttgttaaagaaatc
actaacgaaaccgttttgaattttgaacatacagaagtgacattctttaggacaaatcat
agtataccggattctgtaggcataagttttgctacaacaatgggagcaatcgttcataca
ggtgattttaaatttgatcaaacacctgtaggagaaaattttagcgatgttggaaaaatt
gcgactattggtgataaaggagtattatgccttctatctgatagtataaatgctgaaaaa
ccaggtcattctggatcagaagcgattgttggagaagagatatcagatgttatgtataat
gctgagggaagggttattgtcgctgtatatgcttctaaccttcacagaatacaacaagtc
attaatgcagcagtaaagaataacagaaaactagcagttgtcgggaaaaatatgagaaat
attcttaatcttgctataagtctaggatatatcgatgtcgaggatgaattgttcatttct
atcaacgaaataaataactttggatctaaagaagtggcaattttaacgacaagtaatcat
ggcgagcctcttgctgttttgtctagaatggcaaaacaatcacataaacaagttaatatt
cttaaaggagatacaattctaatctcggcaaccccgatacctggcaatgaattggttttc
tcgagaacgattgacttactttgtagagctggtgcaaatgttgtatttggtcaaaaacaa
gtacatgtctctggtcatggtcatcaagaagagcttaaaatgatgttgaatttgacaaag
cctaaatatttcatcccagttcatggtgaatttaaaatgcaaaaagctcatgctaagctt
gcacagcaggtaggtttgagcgaaaagaatatttttttagttgataaaggtgaggtagta
gaatttaaaggtgaggcggtttatacaggaggtaaagttccttcaggtaatgttttaatt
gacggattaggaattggagatgtcggaaacattgtattaagagaccgtcgcttattatcg
caggatggaattttaattgtagtagttacgctggataagaaaagaaagaaaattacctcg
ggtcctgagatcatcacaagaggttttgtatacgtgcgtgaatcagaacagcttattaca
caagcaactaaggttgtttcagatatcgtggaaaaaagtatgaatgagcaatcaattgaa
tggtcagcgataaagctgaatataagagaagcgttaaatcaatttttatatgaaaaaacg
aagcgtagaccaatgattttgcctatcattatggaaatataa
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