Brachymonas wangyanguii: ACI3EV_03385
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Entry
ACI3EV_03385 CDS
T11206
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bwn Brachymonas wangyanguii
Pathway
bwn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI3EV_03385 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bwn03021
]
ACI3EV_03385 (rho)
03019 Messenger RNA biogenesis [BR:
bwn03019
]
ACI3EV_03385 (rho)
Transcription machinery [BR:
bwn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACI3EV_03385 (rho)
Messenger RNA biogenesis [BR:
bwn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACI3EV_03385 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_25
S1CSD-TOTE-2
AAA
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
XKQ53505
LinkDB
All DBs
Position
complement(722038..723300)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEELEIENTGRMRKQELMSAIIKKRARAGEQVFADGVLEILPD
GFGFLRNPDSNYTASTDDIYISPSQVRRFNLHTGDMVEGEVRTPKDGERYFALNKLDKIN
GLPPEANKHKVMFENLTPLFPTQQMKLERDIKSEENITGRVIDIIAPIGRGQRALIVAPP
KSGKTMMMQSIAHSITANHPDVHLMVLLVDERPEEVTEMQRSVRGEIIASTFDEPATRHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDANALQRPKRF
FGAARKIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIHLDRRLYEKRIFPAIQL
NRSGTRREELLLPPEILQKTRILRQFMYNMDEIEAMELVLKSMKQTKNNHEFFDMMRKGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaacgaactcaaggccctgcacgtctccgaagtgctgaagcaggccgaagaa
ctcgagatcgaaaacaccggccgcatgcgcaagcaggagctgatgtctgccatcatcaag
aagcgcgcccgcgccggcgaacaggtgtttgccgacggcgtgctggaaatcctgcccgac
ggtttcggtttcctgcgcaatcccgacagcaactacaccgccagcaccgacgacatctac
atcagcccgagccaggtacgccgcttcaacctgcacaccggtgacatggtcgagggcgag
gtgcgcacgcccaaggacggcgagcgctactttgcgctgaacaagctggacaagatcaac
ggtctgccgcccgaggcgaacaagcacaaggtgatgttcgagaacctcacgccgctgttc
cccacgcagcagatgaagctcgagcgcgacatcaagagcgaggagaacatcaccggccgc
gtgatcgacattatcgcccccatcggtcgcggccagcgtgcgctgatcgtggcgccgccc
aagagcggcaagaccatgatgatgcagagcatcgcccactccatcacggccaaccacccg
gacgtgcacctgatggtgctgctggtggacgagcgccccgaggaagtgaccgagatgcag
cgttcggtgcgcggcgagatcatcgcctccacctttgacgagcccgccacgcgccacgtg
cacgttgccgagatggtgatcgagcgcgccaagcgcctggtcgaactcaagaaggacgtg
gtcatcctgctcgactccatcacgcgcctggctcgtgcctacaacaacgtcgtgccctcg
tccggcaaggtgctgtccggcggtgtcgatgccaacgcgctgcagcgccccaagcgtttc
tttggtgccgcacgcaagatcgaggaaggcggctcgctgaccatcatcgccaccgcgctg
atcgataccggcagccgcatggacgaggtgatcttcgaggagttcaagggcaccggcaac
agtgaaatccacctggaccgccgcctgtacgaaaagcgcatcttcccggcgatccagctc
aaccgcagcggcacgcgccgcgaggagctgctgctgccgcccgaaatcctgcagaagacc
cgcatcctgcgtcagttcatgtacaacatggatgagatcgaggcgatggagctggtgctc
aagagcatgaagcagaccaagaacaaccacgagttcttcgacatgatgcgcaagggcggc
taa
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