Brachymonas wangyanguii: ACI3EV_08180
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Entry
ACI3EV_08180 CDS
T11206
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bwn Brachymonas wangyanguii
Pathway
bwn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI3EV_08180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwn03019
]
ACI3EV_08180
Enzymes [BR:
bwn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACI3EV_08180
Messenger RNA biogenesis [BR:
bwn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACI3EV_08180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
CMS1
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XKQ52262
LinkDB
All DBs
Position
1689330..1691084
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AA seq
584 aa
AA seq
DB search
MTFEELNLAPELISAVRDLGYEQPSPIQVEAIPLVLAGHDLLGGAQTGTGKTAAFSLPML
QLLNAKPPARNGQVRALVLCPTRELAAQVEESVREYGKHLKLTSTVIFGGVGMNPQIQRL
QKGVDILVATPGRLLDLQGQGAVDLSQVEILVLDEADRMLDMGFIHDVKKVLALLPRNKQ
SLLFSATFSDDIRELAQGLLRDPREVQVTPRNTTVQRITQVIHPVGRNKKKALLAHIIQQ
HDWSQVLVFTRTKFGANHVADYLNKNGISAMALHGNKSQSARTQALAGFKTGELRALVAT
DIAARGIDIDDLPHVVNYEIPNISEDYVHRIGRTGRAGASGTAVNFVCLDEEGFMHAIEK
FTRQQIPVEFVEGFGPEEGEKAEPIAMGRQTLWGGAGKPPGRDVMAAAAKAARQEMMQRI
RENKTARPAGGRSKPAADATQADGQIAGQQPPSSADNGDNAQRNRRRRNRFRSGGGGEQR
QDSYGESAAQREPREPREPRQHKPRNPQQQPHGNAGGQNRSRRSPQRAGSEAQPRSHESQ
LFKGEFGVPRSQGNGGQPDPLRTSVDSLRRSNRNKRGGGGGFGW
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgaagaactgaacctggcgcccgagctgatttctgccgtgcgcgatctgggc
tatgagcagccctccccgatccaggtcgaggccatccccctggtgctggcaggccatgac
ctgctcggcggtgcccagaccggcaccggcaagaccgccgccttttcgctgccgatgctg
cagctgctcaacgccaagccgccggcccgcaatggtcaggtgcgcgccctggtgctgtgt
ccgacacgtgaactcgccgcccaggtcgaggaatcggtgcgtgaatacggcaagcacctg
aagctgacatccaccgtgatcttcggcggcgtcggcatgaacccgcaaatccagcgcctg
caaaaaggcgtggacatcctggtcgccacgccgggccgcctgctggatctgcaaggccag
ggtgccgtcgacctgtcccaggtcgagatcctggtgctggacgaagccgaccgcatgctg
gacatgggcttcatccacgacgtcaagaaagtgctggcgctgctgccgcgcaacaagcag
agcctgctgttctccgccaccttcagcgatgacatccgcgaactggcccagggcctgctg
cgcgatccgcgcgaagtgcaggtgaccccgcgcaacaccacggtgcagcgcatcacccag
gtgatccacccggttggccgcaacaagaagaaggcgctgctcgcgcacatcatccagcag
cacgactggagccaggtgctggtgttcacgcgcaccaagttcggcgccaaccatgtggcc
gactacctgaacaagaacggcatcagcgccatggcgctgcacggcaacaagagccagtcg
gcgcgcacgcaggcactggccggcttcaagaccggcgagctgcgcgccctggtcgccact
gacatcgccgcacgcggcatcgacattgatgacctgccgcacgtggtcaactacgaaatc
ccgaacatctccgaagactatgtgcaccgcatcggccgtaccggtcgcgctggtgccagc
ggcactgccgtcaacttcgtctgcctggacgaggaaggcttcatgcacgcgatcgagaag
ttcacgcgccagcagatcccggtcgagtttgtcgagggctttggtccggaggaaggcgaa
aaggccgagccgatcgccatgggccgccagaccctgtggggcggtgccggcaagccgccg
ggccgcgacgtcatggcagccgctgccaaggccgcgcgccaggaaatgatgcagcgcatc
cgcgagaacaagaccgcccgcccggctggcggccgcagcaagccggctgctgatgccacc
caggccgatggccagatcgccggccagcagccgccatcatctgccgataacggtgacaac
gcccagcgcaatcgccgccgtcgcaaccgcttccgcagcggtggtggtggtgagcagcgc
caggacagctacggcgaatccgctgcccagcgcgagccacgtgaaccacgcgagccgcgt
cagcacaagccgcgcaacccgcagcagcagccgcatggcaacgccggcggccagaaccgc
agccgccgcagcccgcagcgcgccggcagcgaggcccagccgcgcagccacgaaagccag
ctgttcaagggggaattcggcgtgccgcgcagccagggcaacggcggtcagccggacccg
ctgcgcaccagcgtggacagcctgcgtcgcagcaaccgcaacaagcgcggtggtggtggc
ggcttcggctggtaa
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