Bilophila wadsworthia: WCP94_001129
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Entry
WCP94_001129 CDS
T11092
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bws Bilophila wadsworthia
Pathway
bws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCP94_001129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bws03019
]
WCP94_001129
03016 Transfer RNA biogenesis [BR:
bws03016
]
WCP94_001129
Enzymes [BR:
bws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WCP94_001129
Messenger RNA biogenesis [BR:
bws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WCP94_001129
Transfer RNA biogenesis [BR:
bws03016
]
Prokaryotic type
tRNA degradation factors
WCP94_001129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XUR84489
LinkDB
All DBs
Position
293681..295918
Genome browser
AA seq
745 aa
AA seq
DB search
MSFRKAPTRVSATIGGKEIILETGRVATQAHGSVTIQCGGTVVLVTVCSQPLDFDRGFFP
LTVEYSERMYAAGRIPGSFFRREIGRPSERETLVSRLIDRPIRPLFPKGLPEDVQVLASV
ISSDQENESDVLSITAASAAVMLSPLPFAEAVAGGRIGRINGQFILNPTVKEMAESDLNI
VFAASADALVMVEGEATFVPEDVIIDALEWGRKEIQPLVEAQVKLRELAGKAKMAFTPQE
DDAALLARIEELAAGAGLEAAMRVPEKMARKDARKLVKEKIVEALKADPTYGEDEKALSS
VGDIIGHIEKKVVRKRILDEGTRIDGRDTKTVRPIEIQPGILPRAHGSALFTRGETQSLC
VTTLGSSTDNQRMDSLTGDVTKTFMLHYNFPPFSVGEVKPVRVSRREIGHGALAEKALKP
IIPAGDGFPFTVRVVAETLESNGSSSMAAVCGGCLSLMDAGVPISDPVAGVAMGLIKEGD
NFIVLTDILGDEDALGDMDFKIAGTAEGVTAVQMDIKITGLTTEIMRKAMRQAHEARLHI
LGEMKKAIDGPRAELSKYAPQHAEVFVNPEVIRMIIGPGGKNIKAITAATGASVDIEDSG
RISIFAPTAESMEQAKELVQYYDQRPDLGKNYMGKVRKVLEIGAIVEIMPNVEALVHISQ
LDTSRVAQASDVAHLGEDMLVKVIEINGDRIRASRKAVLLEEQGIEWKPEDTARPARAPR
GEGDRDHRGDRGDRGERRERRPRRD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagttttagaaaagcccccacccgggtttccgccaccatcggcggcaaggaaatcatc
cttgagaccggccgcgtcgctacgcaggcccacggctccgttaccatccagtgcggtggc
accgtcgtgctcgttaccgtttgttcacagcccctcgacttcgaccgcggcttcttcccg
ctgaccgtggaatattccgagcgcatgtatgccgcgggccgtatccccggcagcttcttc
cgccgtgaaatcggccgtccgtccgagcgcgaaaccctcgtttcccgcctcatcgaccgc
ccgatccgcccgttgttccccaagggcctccccgaagacgtgcaggtgctcgccagcgtc
atttcctccgaccaggaaaacgaatccgacgtgctctccatcacggccgcttccgccgcc
gtcatgctgtcgcccctgcccttcgccgaagccgtcgccggcggacgcatcggccgcatc
aacggccagttcatcctgaaccccaccgtcaaggaaatggccgaaagcgacctgaacatc
gtgttcgccgcttccgccgacgcgctggtcatggttgaaggcgaagccacctttgttccc
gaagacgtgatcatcgacgccctcgaatggggccgcaaggaaatccagcccctcgtcgaa
gcgcaggtcaagctgcgcgagctcgcaggcaaggcgaagatggccttcaccccgcaggaa
gacgacgcggccctgctcgcccgcatcgaagaacttgccgccggagccggcctcgaagcc
gccatgcgcgtgcccgaaaagatggcccgcaaggacgcccgcaagctcgtgaaggaaaag
atcgtcgaagccctcaaggccgatccgacctatggcgaagacgaaaaggccctctcctcc
gtcggcgacatcatcggccacattgaaaagaaggtcgtgcgcaagcgcatccttgacgaa
ggcacccgcatcgacggacgcgacaccaagaccgtgcgccccattgaaatccagcccggc
atcctgccccgcgcccacggctccgcgctgttcacgcgcggtgaaacgcagtccttgtgc
gtgaccacgctcggcagctccacggacaaccagcgcatggattcgctcaccggcgacgtg
accaagaccttcatgctgcactataacttcccgcccttctccgtgggcgaagtgaagccc
gtccgcgtgtcccgccgcgaaatcggccacggcgcgctggccgaaaaagccctcaagccc
atcatccccgcgggcgacggcttccccttcaccgtccgcgtggtggccgaaacgctggaa
tccaacggttcctcctcgatggccgcggtgtgcggcggctgcctgtccctcatggacgcg
ggcgtgccgatttccgatccggtcgccggcgtggctatgggcctcatcaaggaaggcgac
aacttcatcgtgctgaccgacatcctcggcgacgaagatgccctcggcgacatggacttc
aagattgccggtaccgccgaaggcgtaaccgccgtgcagatggacatcaagatcaccggc
ctgaccaccgagatcatgcgcaaggccatgcgtcaggcgcatgaagcccgcctgcatatc
ctcggcgaaatgaagaaggccatcgacggcccccgcgccgaactctccaagtatgccccg
caacatgccgaagtcttcgtgaaccccgaagtcatccgcatgatcatcggacccggcggc
aagaacatcaaggcgatcaccgccgccactggcgcttccgtggacatcgaagacagcggc
cgcatctccatcttcgcccccacagccgaatccatggaacaggccaaggaactggtgcag
tactatgaccagcgccccgacctcggcaagaactacatgggcaaggtccgcaaagtgctg
gaaatcggcgccattgtggaaatcatgcccaatgtcgaagccctcgtgcacatttcgcag
cttgataccagccgcgtggcgcaggcttccgacgtggcccacctcggcgaagacatgctg
gtgaaggtcatcgaaatcaacggcgaccgcatccgtgccagccgcaaggccgtcctcctc
gaagaacagggcatcgaatggaagcccgaggacaccgcccgccccgcccgtgctccgcgc
ggcgaaggcgaccgcgatcatcgcggtgaccgtggggatcgcggcgaacgccgcgaacgc
cgtccccgccgcgactaa
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