Bilophila wadsworthia: WCP94_002576
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Entry
WCP94_002576 CDS
T11092
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bws Bilophila wadsworthia
Pathway
bws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCP94_002576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bws03021
]
WCP94_002576
03019 Messenger RNA biogenesis [BR:
bws03019
]
WCP94_002576
Transcription machinery [BR:
bws03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WCP94_002576
Messenger RNA biogenesis [BR:
bws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WCP94_002576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA
ATPase_2
AAA_14
OB_RNB
AAA_25
DUF5106
Motif
Other DBs
NCBI-ProteinID:
XUR85936
LinkDB
All DBs
Position
1703372..1704625
Genome browser
AA seq
417 aa
AA seq
DB search
MMSLTELKNMSMSVLMELAEKYEIENASSMRKQELIFAMLQACASRSGAIYGDGVLEILP
DGYGFLRSPLSSYMPGPDDIYVSPSQIRRFYLRKGDVVSGQIRPPKEGERYFALLKVKEI
GFEPPENARHVVLFDNLTPIYPDRKLIMENGEKNLSCRVIDLMSPIGRGQRGVIVAPPRT
GKTILLQSIANSINANHPEVYLIVLLIDERPEEVTDMERTVKNAEVISSTFDEPPQRHVQ
VCEMVLEKAKRLVERKRDVVILLDSITRLGRAYNAVTPSSGRVLSGGLDANALQRPKRFF
GAARNIEGGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIYLDRHLAEKRVFPAIDIN
RTGTRKEDLLLSDDVLKRVWILRKILAPMSSIDSMEFLLDKMRGTKSNEEFINAMSK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccttactgaactgaagaacatgagcatgtccgtgctcatggagcttgcggaa
aagtacgagatcgaaaacgccagttccatgcggaagcaggaactcatctttgcgatgttg
caggcttgtgcgtcccggagcggtgccatttacggcgacggggtgctggaaatcctgcct
gacggctacggttttttgcgttccccactgtcgagctatatgcccggcccggacgatatt
tatgtttccccctctcagattcggcgcttttatctgcgcaagggtgatgtggtttccggg
cagatacggcctcccaaggaaggggagcgttatttcgccttgctcaaggtgaaggaaatc
ggttttgaacccccggaaaacgcccgccacgtcgttctttttgataacctcacgcctatt
tatcccgatcgcaagctgatcatggaaaacggcgagaaaaatctgtcctgccgggtcatc
gatctcatgtcgcccatcgggcgcggccagcgcggggtcatcgtcgcgcctccccggacc
ggtaaaaccatcctgctccagagcatcgcgaattccatcaacgcgaaccatcctgaagtc
tatctcatcgtgctgctcatcgatgaacgtcccgaagaagtgacggatatggagcgcacg
gtcaagaatgccgaagtcatcagttccacgttcgacgaacctccgcagcgccatgtgcag
gtctgcgaaatggtgctcgaaaaagccaagcgccttgtcgaacgcaagcgtgacgtggtc
atcctgctcgactccatcacccgccttggccgcgcgtacaacgccgtgacgccttcgtcc
ggccgcgtgctttccggtggtctggacgccaacgcccttcagcggcccaagcgcttcttc
ggcgcggcccgcaacatcgagggcggaggcagcctgaccatcatcgccacggcgctcatc
gatactggctcccgcatggatgaagtgatctttgaagaattcaaaggcaccggcaatatg
gaaatctatcttgatcgccatctcgccgaaaagcgcgtgttcccggctatcgacatcaac
cgtaccggaacccgcaaggaagatcttctcctctccgacgacgtgctcaagcgcgtctgg
atcctccgcaagatccttgcacccatgtcttccatcgacagcatggaattcctgctcgac
aagatgcgcggcaccaagtcgaacgaagaattcatcaatgccatgagcaaataa
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