KEGG   Bilophila wadsworthia: WCP94_002857
Entry
WCP94_002857      CDS       T11092                                 
Name
(GenBank) RecD-like DNA helicase YrrC
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bws  Bilophila wadsworthia
Pathway
bws03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bws00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    WCP94_002857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bws03400]
    WCP94_002857
Enzymes [BR:bws01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     WCP94_002857
DNA repair and recombination proteins [BR:bws03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     WCP94_002857
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC SH3_13 UvrD_C_2 AAA_11 UvrD-helicase PIF1 Viral_helicase1 HHH_5 NAT10_TcmA_helicase AAA_16 SLFN-g3_helicase T2SSE AAA_22 AAA_29 NPHP3_N nSTAND3 ABC_tran nSTAND_NTPase5 RsgA_GTPase DEAD AAA_28 AAA NTPase_1 MeaB NACHT cobW Zeta_toxin PhoH Flavi_DEAD TrwB_AAD_bind DAP3 ATPase_2 KAP_NTPase NB-ARC AAA_23 TraI_hel_assoc_N TsaE SRP54 AAA_24 FtsK_SpoIIIE MobB Thymidylate_kin ResIII AAA_14 Mg_chelatase SMC_N GpA_ATPase
Other DBs
NCBI-ProteinID: XUR86217
LinkDB
Position
1950937..1953168
AA seq 743 aa
MTQLSLSSLDDTVELQGTLERVVFHNEENGYTVFRVRPEGKDEVDLVTVVGHMGSPQAGA
SLRIKGRWVNNARFGRQVQMDSFESLLPATAEGIKLYLASGLIKGIGKSIAARIVKAFGE
DTLRIFDEEPQRLLEISGITQKKLVTIVECWTEHQGVRNLVQFLQPHDIGASFAVRIYKH
YGPQALSIVQENPYRLAMDIRGIGFLTADALAAKLGFESEHPLRIQAGTLYTLMKQIDDG
HVYYPRRALVEQTCSQLGIAEEFVEEAVDCLAREERVVLEELDDEIGVYLTRFYHYESKI
AYYLRRILASPKSVRFPKADEVVEKVVSRLGITLAEEQLEAVRTSATSKVMVLTGGPGTG
KTTILNAIIQVFAENKAKILLAAPTGRAAKRMSEAIGREARTIHRLLEYTPKDDGFARNE
DNPLACGLLVVDEASMMDTMLAYHLLKAAPLGATIVFVGDVHQLPSVGPGNVLGDLIASG
AMPVVELVEVFRQAAESEIVCNAHLINRGELPRLESSKDRLSDFYFMRQDDPDRAADIIV
DLVKNHIPRRFQLDPFDEIQVLSPMHKGTVGAANLNLRLQQALNPEGEALQRGERFYRLG
DKVMQIRNNYEKDVYNGDIGRVSSVDVQEKCLVVRYDDRYVGYDWEELDEIVAAYAISIH
KSQGSEYPAVVIPLMTQHYMLLQRNLIYTGVTRGKRLVVLVGEPRALAMAVKNNRMQKRY
TWLARRLGAAPEAAGPQTEGERT
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgacgcagctttctctttcatccctcgacgatacggtggaattgcagggcacgctggag
cgtgtggtcttccataatgaggaaaacggctacacggtgttccgggtcaggccggaaggc
aaggacgaggtggatctcgtcaccgtggtcgggcatatgggcagcccgcaggcgggcgcg
tccctgcgcatcaagggccggtgggtgaacaacgcccgcttcggcaggcaggtgcagatg
gattcctttgaaagcctgctccccgccaccgccgagggcatcaagctgtatctggcctcc
gggctgatcaagggcatcggcaagagcatcgcggcgcgcatcgtcaaggcgttcggcgaa
gacacgctcaggattttcgacgaagaaccgcagcgcctgctggaaatttccggcatcacc
cagaagaagctggtgaccatcgtcgagtgctggaccgagcatcagggcgtgcgcaatctg
gtgcagttcctccagccgcacgatatcggcgcgtccttcgccgtccgtatctataagcat
tacggcccgcaggcgctgtccatcgtgcaggagaacccctaccggctggcgatggacatc
cggggtatcggctttctgacggcggatgcgctggcggccaagctcggttttgaaagcgag
caccctttgcggattcaggcgggcacgctgtacacgctgatgaagcagatcgacgacggg
cacgtctattatccccgccgggccttggtggaacagacctgttcccagctcggcatcgcg
gaagagttcgtcgaggaggccgtggactgcctcgcccgtgaggaacgggtggtgctggag
gaactcgacgacgagatcggcgtgtacctgacccggttctatcattacgaatcgaagatt
gcctattacctgcggcgcatcctcgcctcgccgaagtcggtgcggttccccaaggccgac
gaggtggtggagaaagtcgtgtcccggctcggcattacgctggccgaggaacagcttgag
gccgtgcgcacatcggcgacgtccaaagtaatggtgctgaccggcggccccggtacgggc
aagaccaccatcctgaacgcgatcattcaggtttttgcggaaaacaaggccaagattttg
ctggccgcgcccacgggccgggcggcgaagcgcatgtccgaggccatcggccgggaagcc
cgcacgatccaccgcctgctcgaatacacgcccaaggacgacgggttcgcccgcaacgag
gataacccgttggcctgcgggctgcttgtggtggacgaggcgtccatgatggacaccatg
ctggcttaccacctgctcaaggcggccccgctcggcgcgaccatcgtattcgtgggcgac
gtgcatcagcttccgtccgtggggccgggcaacgtgctcggggatctcatcgcttccggg
gccatgcccgtggtcgagctggtggaggtgttccggcaggcggcggaaagcgaaatcgtg
tgcaacgcccacctgatcaaccggggcgagctgccacgccttgaatcctcaaaggatcgc
ctttccgatttctatttcatgcggcaggacgatcccgatcgcgcggcggacatcatcgtg
gatttggtcaagaaccacatcccccgccgtttccagcttgatcctttcgacgaaatccag
gtgctttcgcccatgcacaagggcaccgtgggcgcggcgaacctcaacctgcggctccag
caggcgctcaatcccgaaggggaggccctgcagcgcggagagcggttctaccggctcggc
gacaaggtcatgcagatccgcaacaactatgagaaagatgtgtacaacggcgatatcggg
cgggtttccagtgtggacgtacaggaaaaatgccttgttgtccggtatgatgaccgttat
gtcgggtacgattgggaagaactcgacgaaatagtggcggcctacgcaatttccattcac
aaatcacagggttcggaatatcctgccgtcgtcattccgttgatgacgcagcactatatg
ttgctgcagcggaatctcatctatacgggggtgacgcggggcaagcgtcttgttgtactg
gtaggagagccccgcgctttggcgatggccgttaaaaacaaccggatgcagaagcggtat
acgtggctggcccgacgtttgggggcggccccggaggccgccggtccgcaaactgagggt
gaacgcacatga

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