Bilophila wadsworthia: WCP94_003135
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Entry
WCP94_003135 CDS
T11092
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bws Bilophila wadsworthia
Brite
KEGG Orthology (KO) [BR:
bws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bws03400
]
WCP94_003135
DNA repair and recombination proteins [BR:
bws03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WCP94_003135
Archaeal homologous recombinant proteins
WCP94_003135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
cobW
NTPase_1
AAA_22
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XUR86495
LinkDB
All DBs
Position
complement(2240403..2244101)
Genome browser
AA seq
1232 aa
AA seq
DB search
MRILQIRFKNLNSLAGEWTIDLTHPAFLSDGIFVITGPTGAGKTTILDAVCLALYGRTPR
LPRVTKSENEIMSRQTGECFAEVTFETRAGTFRCHWSQWRARKKASGELQAPRHELSDAA
SGRILENNIRGVADKVEEATGMDFERFTRSMLLAQGGFAAFLQAPADQRAPILEQLTGTE
IYSDISKRVHTRVVLERTRLETLEAELAGIHLLEEAEEQRLHADLASLIERASEAARQSD
RTQQALLWLEGIRTLQTELTMLENRKKQLAERLEAFQPERRKLERANRALELSGAYAGLV
SLRNAQAQDLRQQKEYGEALPICEAELRQTETAFASAGTVLEQGKREREQGLRTIRAVRE
YDVKILEKETALSALKRELAERENAFTTAQSTHQSLNAQLADTRASLTEVLAALQRTAAD
QGLVENLSAIQHSCGQLRQLAETGREKKHAVETALARQQETIKAHMDALALKERQERETA
CLEQAVALRRKALAELLGDRSVADWRASLMNTATRGGLLDKTEEALRQYETSLLGIKALE
QRQEKRARDEAELTQRLQSAEKEHRRLEAECEKREAEQAECSRLRFFEEARRHLHNGEPC
PLCGATEHPFTGFSVPAPAGPEEHLARLKEELKRSGTALASLQGDLAGLSREREWVTEQL
QKEAAALSEHETHVRECLAALAHPSITPATPKQPLPAALLLTLQNLRETTETEQRLAERI
LQQAEQEDAGLQADMTAWEKARHEANRLELALQTALHNKDSAEQEAVRTERERCSLLEQY
TALRQTVLQGLQAYGIESLTVDGLETLLHNLSERRERWVSREKRRDLLQQKMSALELESR
HLAFRLLDMEKDLDKQREAARSLSEDREKLRLDRRRLLGDKSPDEEEKRLNGLVEEAEKR
LEGVRQTVDAAKQHLAGLTSKRETLDRSIAERQAQIGPLEEDFRLRLSQTGFADEAEYRD
ACLTETVRNTLTQKEQGLLTERAELEARLADRIAQLAAEREKQVTDRTQEELDETLATLR
DTLKNQQEAIGGLRQKLHDNHMVKLAHQERTAAVEAQRRECRRWNDLHDLIGSADGKKYR
NFVQVLTFEIMIEHANRQLRRMTDRYLLLRNKEQPLELDVIDGYQAGEVRSTKNLSGGES
FIVSLALALGLSQMASKTIRVDSLFLDEGFGTLDEDTLDTALDTLAGLHRDGKLIGVISH
VAALKERIGTQIQVTPKTGGRSVVNGPGCSSV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctccagatccgcttcaagaacctcaattcccttgctggggaatggaccatt
gatcttacgcacccggcttttctgtcggacggcattttcgtcatcaccggccccacgggc
gcgggcaagacgaccatcctcgacgccgtgtgccttgccttatatggccgcacgccgcgc
ctgccccgcgtcaccaaaagcgaaaacgaaatcatgtcccgccagaccggggaatgcttc
gccgaagtcaccttcgaaacgcgggcgggtacgttccgctgccattggagccagtggcgg
gcgaggaaaaaagcctccggggaattgcaggccccccgccacgaactttccgacgccgct
tcgggccggatcctcgagaacaacatccggggggtggccgacaaggtggaagaagccacc
ggaatggacttcgaacgcttcacgcgctccatgctccttgcacaggggggcttcgccgcg
ttcctgcaggcgcctgcggatcagcgcgcccccattctggaacagctcacgggcacggaa
atctattcggatatatctaaacgcgtgcacacgcgggtcgtgcttgagcgtaccaggctc
gaaacgctggaggcggagctggcgggcatccacctccttgaagaagcggaagaacagcgc
ctccatgcggatctggcctccttgatcgaacgggcttccgaagcggcgcggcagtccgac
cggacgcaacaggccctgctctggctggagggcatccgtacccttcagactgaactgacc
atgctggaaaaccgcaagaaacagcttgcggaacggctcgaagcgtttcagccggaacgc
cgcaagctggaacgcgccaacagagcattggagctttccggggcgtatgccgggctcgtt
tccctccggaacgcccaggcgcaggatctccgccagcaaaaggaatacggcgaggctttg
cccatatgtgaagccgaattgcggcaaacggaaacggcgttcgcttcagccgggacagtg
ctggaacaaggcaaacgggaacgtgagcaaggcttgcggacaatccgcgccgtgcgggaa
tatgatgttaaaatccttgaaaaagagacggccctgtccgccctcaaacgggaacttgcc
gagcgggaaaacgcctttaccaccgcgcaatcgacccatcaaagcctgaacgcgcaattg
gccgacacccgagccagccttacggaggtgcttgccgccctgcaacgtacggcggcggat
caggggcttgtcgaaaacctgtccgccatacagcactcctgcggacaattgcggcaactg
gctgaaacggggcgcgaaaagaagcatgccgtcgaaacggctttggcccgccagcaagag
acgatcaaagcgcatatggacgcgcttgccctcaaggaacggcaggagcgggaaacggcc
tgtctggaacaagcggtcgccttgcgccggaaggccctggcggaactcttgggcgatcgg
agcgtcgccgactggcgggcaagcctcatgaacacggcaacccgcggcggtctgctggac
aaaaccgaggaggcgctgcggcaatacgaaaccagccttctgggaatcaaggcacttgag
cagcggcaagaaaaacgtgcccgcgatgaggccgaactcacgcagcgcctgcaatccgcc
gaaaaagaacaccgccgtctggaggcggaatgtgagaaacgggaagccgaacaggccgaa
tgctctcgcctgcggttttttgaagaagcgcggaggcatctccataacggggaaccgtgc
ccattatgcggagccacggaacaccccttcaccggattttccgtgcccgcccccgccggg
ccggaggaacatcttgcgcggcttaaggaagaactgaaacgctccggaacagctttggcc
tccctccaaggcgatctcgccgggctgtcgcgtgaacgggaatgggtgacggaacagctg
caaaaagaagccgccgcactgtccgaacacgaaacgcacgtgcgcgaatgcctcgccgcg
ctggcacatccctccatcacccccgccacgccaaagcagccgcttccggccgccctgctc
cttacgctccaaaatctgcgggaaacgacggagacagagcagcggctggctgaacgcatc
ctgcaacaggctgaacaggaggacgccgggctgcaagccgacatgacggcatgggagaag
gcccggcacgaagcgaaccggctggaactggccctgcaaaccgccctccacaacaaggac
agtgccgaacaggaagccgtgcgcaccgaacgcgagcggtgttcgcttctggagcagtac
acggcattgcgtcaaaccgttttgcaggggctgcaagcttacggcatcgaaagcctcacg
gtggatgggctggagactttgctccacaacctgtctgaacgccgtgaacgctgggtatcc
cgggaaaagcggcgtgacctcttgcagcaaaaaatgagcgcgctggaactggagtcccgg
catctcgctttccggcttctcgatatggagaaagatctggacaagcagcgggaagcggcc
cgctctctgtcggaggatcgggaaaagctgcggctcgaccggaggcggctgcttggggac
aaatccccggatgaggaagagaaacggctcaacgggctcgtcgaagaagccgaaaagcgg
cttgaaggcgtccgccaaaccgtcgatgccgccaaacagcaccttgctgggctgaccagc
aaacgggaaacgctcgatcgctcgatcgcggaacgtcaggcacaaattgggccgctggaa
gaggatttccggcttcgcctctcacaaaccggcttcgccgacgaagcggaataccgggac
gcctgcctcactgaaacggtgcggaataccttgactcagaaggaacaggggctgctcacg
gaacgggccgaactggaagcgcgtctggccgaccggatcgcgcagttggccgccgaacgc
gaaaaacaggtgacggatcgcacacaagaagaacttgacgaaacgctggcaacgcttcgg
gatactctcaagaaccagcaggaagccatcggcggcctgcggcagaagctccacgataac
cacatggtcaagctggcgcatcaggagcgcacggcggcggtggaggcgcagcgccgcgag
tgccgccgctggaacgatctgcacgatctcatcggctccgccgacgggaaaaaataccgc
aatttcgtgcaggtgttaacgtttgaaatcatgatcgagcacgccaaccgccagctacgg
cgcatgaccgaccggtatctgcttctccgcaacaaggagcagccgttggagctcgacgtc
atcgacggctatcaggccggagaagtccgctctaccaaaaacctgtccggcggcgagagt
ttcatcgtgagccttgccctcgccctcgggctttcgcaaatggccagcaagacgatacgg
gtggactcccttttcctcgacgaagggttcggcacgctggatgaggatacgctggacacc
gcgctggatacgctggccgggctgcaccgggacggcaagctcatcggcgtgatttcgcat
gtggcggccttgaaggagcgcatcgggacgcagatacaggtcactcccaaaaccggaggc
cgcagcgtcgtcaacggccccggctgctcttcggtataa
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