Bilophila wadsworthia: WCP94_003542
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Entry
WCP94_003542 CDS
T11092
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bws Bilophila wadsworthia
Pathway
bws03030
DNA replication
bws03430
Mismatch repair
bws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WCP94_003542
03430 Mismatch repair
WCP94_003542
03440 Homologous recombination
WCP94_003542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bws03032
]
WCP94_003542
03400 DNA repair and recombination proteins [BR:
bws03400
]
WCP94_003542
Enzymes [BR:
bws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WCP94_003542
DNA replication proteins [BR:
bws03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WCP94_003542
DNA repair and recombination proteins [BR:
bws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WCP94_003542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
XUR86902
LinkDB
All DBs
Position
complement(2629405..2632932)
Genome browser
AA seq
1175 aa
AA seq
DB search
MSEFVHLHCHTEYSLLDGAIRLNDLCARAKDFGMPAAAITDHGNLYGAAYFYTTCKSYGI
KPVIGCEVYVTKDHRDKDSEFSRVRHHLILLAKNNEGYHNLVRLVSKGFLDGFHYKPRVD
KALLRQHSEGLIALSACLAGEIPRTLMGANKLITNGGTFDDAIRQTQEYMDIYDGRFYLE
IQANTLPDQATLNNKLLELAEHTKVPLVATNDCHYLNADDVEAHDVLLCIQTQAKVNDAK
RMRFEARDLYYKSAEEMEQAFKHIPEALSNTVRIAEECHVEMDFTHHYFPVYELPEGMTL
STEFQRLAREGLKQRLELHPDRDTIDHQIYWDRLEMELKVICEMGFPGYFLIVQDFINWA
KGNDIPVGPGRGSAAGSIVAWALRITNLDPLPYNLIFERFLNIERVSLPDIDVDFCEDKR
TRVIQYVSQKYGIDSVSQITTFGKMKAKAVVRDVGRALDMSFKETDRIAKLIPDDLKMTI
KKALDAEPELATLYKEDQIIRKLIDISMRLEGLSRHASTHAAGVVVSDKPMDEYLPIYRG
KKGELVTQFDMKMVEKVGLVKFDFLGLRTMTLIDNTLKAIEEQGKKAPNLDILPLTDPDT
YDVFSRGDTDGVFQVESSGMRQYLRMLRPNCFEDIIAMLALYRPGPLGSGMVDEFIKRKH
GEVDVTYPLPSLEGCLKDTYGVIVYQEQVMQIAQIVAGYTLGGADLLRRAMGKKNAEAMA
KERTLFVDGAVKNGTSKEKATEIFDLMEKFAEYGFNKSHSAAYALISYHTAYLKTHHKVE
FMAALLTSEIGNQDKILKYIAACKDNDIEVRQPDVQVSRREFIVRDEAVVYGLGGIKNVG
DEAIREIVAAREKDGPFLSFLDLCIRVSLRKVTKRVLESLIKGGALDCFGCSRAAMVAAI
DPVVARAQKKIKEKQSNQISLLTLAPKKIEENQSSGIGFSCEEESISEWDEDQKLRFEKE
ALGFFLTSHPLQPYRHELNRLDLRPLEDCREMVDKATIKCAVLVTSIREILNKRGNRMAF
VAVEDLTASGEVTFFTEELNASRDLLNSEQPLLLTATIDNRESSSYSPDSDDDSDDEAPV
KEIKLRGVSVQALNDACSASDAPISWELDPRRLNAEGMESLKAILERHKGNTEMQLAFCL
DGTFCRVRLGPQWMVTPGPAFQQDMHRWCSANPVQ
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatttgtgcatctgcattgtcacactgagtacagtcttctcgacggcgcgatt
cgtctgaacgatttatgcgcacgcgccaaagatttcggaatgcctgccgccgcgattacc
gatcatggcaacctgtacggcgcggcttatttctatacgacatgcaagagttacggcatc
aaacccgtcatcgggtgcgaagtctacgttaccaaggatcaccgggataaggattccgaa
ttctcccgtgtccggcaccatctgattttactggcgaagaacaacgaggggtaccataat
ctggttcgccttgtctccaagggcttcctggacggcttccactataagccccgcgtggat
aaagccctgcttcgccagcacagcgaagggctcattgcgctttccgcgtgccttgccggt
gaaatcccccgcacgttgatgggagccaacaagctgatcacgaacggagggacgtttgac
gacgccatccggcaaacgcaagagtacatggatatctacgatgggcgtttctatctggaa
atccaggccaatacgctgcccgatcaggcgactctgaacaataagctgttggagcttgcg
gaacataccaaagtccctttggttgcgacgaacgactgccattacctgaacgcggacgac
gttgaggcccatgacgtcctgctgtgtattcagactcaggcaaaagtcaatgatgccaaa
cgtatgcgttttgaagcgcgggatctctattacaaatccgctgaggagatggagcaggcg
ttcaagcatattcccgaagccctttccaatacggtccgcatagctgaagaatgccatgtg
gagatggacttcacgcaccactacttccccgtatacgaacttccggaagggatgaccctg
tcgacggagttccagcgccttgcgcgtgaaggcctcaaacagcgtctggaactgcacccc
gatcgggacacgattgatcaccagatctattgggatcgtctcgagatggagcttaaagtc
atctgcgagatgggcttcccggggtattttctgatcgtgcaggacttcatcaactgggcg
aaggggaacgacatcccggtcggtcccggtcgtggttccgcggccggttcgattgtcgcg
tgggctttgcgtatcacaaaccttgatcccctgccctacaatctcattttcgaacgcttc
ctgaatatcgaacgcgtcagcctgcccgatatcgacgttgacttctgcgaagacaagcgt
acccgtgtgatccagtacgtgagccaaaaatacggtattgattccgtatcgcagatcacg
acgttcggaaaaatgaaagccaaagcggtggtccgcgacgtagggcgtgcactggatatg
tccttcaaggaaaccgaccgcatcgccaagctcatccccgatgatctcaagatgaccatc
aagaaggcgctggacgcggagcccgagctggcgaccctctataaggaagatcagatcatc
cgcaaactgatcgacatctccatgcgtctggaggggttgtcacgtcacgcatcgacgcac
gccgctggcgtggttgtttccgacaagccgatggatgagtacttgcctatctatcggggg
aaaaaaggcgaacttgtcacccagttcgatatgaaaatggtcgaaaaagtggggctcgtg
aagttcgacttccttggtctgcggaccatgaccctgatcgacaacaccctgaaagccatt
gaagagcaagggaagaaggctcctaaccttgacatccttcctttgacggaccccgatacc
tatgatgtcttttcccggggcgatacggacggcgtgtttcaggtggaaagctcgggtatg
cgccagtacttgcgtatgctccgcccgaactgctttgaagacatcatcgctatgctggcg
ctgtaccggcccggcccgcttggttcgggcatggtcgatgaattcatcaagcgtaagcac
ggagaagtggacgtcacctatccgctgccgtcgttggaaggctgcctgaaagacacctac
ggggttatcgtctatcaggaacaggtcatgcagatcgcgcagattgtcgccgggtatacc
ctcggcggcgcagacctgctccggcgagcgatggggaagaaaaacgccgaagccatggcc
aaagaacgaacccttttcgtggacggtgccgtcaagaatggcaccagtaaggaaaaggcg
acggaaatctttgacttgatggaaaaattcgcggaatacggtttcaacaaatcgcattcc
gccgcgtatgcgctcatttcttaccatacggcgtatctgaagacccaccataaggtggaa
ttcatggccgccctgctcacttcggaaatcggcaatcaggataagatcctcaaatacatt
gccgcctgcaaggacaacgacattgaagtccggcagcctgatgtgcaggtcagccgccgc
gagttcatcgtgcgcgacgaggcggtggtttacggtttgggcgggatcaaaaacgttggt
gatgaagccatccgcgaaatcgttgccgcccgtgagaaggacggtccattcctttcgttc
ttggatctgtgtattcgcgtcagcctgcggaaagttacaaaacgggtcttggaaagcctc
atcaagggaggcgcgctggattgcttcggctgttcccgcgccgctatggttgcggccatt
gatccggtggtcgcccgtgctcaaaagaagatcaaggaaaaacaatccaatcaaatatcc
ttgttgacgcttgcccccaagaaaattgaagaaaatcagtcgtctgggataggcttctcc
tgcgaggaagaaagcatttcagagtgggacgaggatcagaagctccgctttgagaaggaa
gcgcttggcttctttttgaccagccatcctttgcagccctatcggcatgaactgaatcgg
ttggatctgcgcccgctggaagactgccgggaaatggtggacaaggcgacgatcaagtgc
gcggtgttggttacaagtatccgcgaaatcctcaataaacgtggaaaccgcatggctttc
gtcgctgtggaagatctcacggcttccggtgaagtaacgttctttacggaggaactgaat
gccagccgagatctgctcaactcggaacagccgcttttgctgaccgcgactatcgacaat
agagaaagctcgtcttattctcctgattcggatgacgattcggacgatgaggccccggtc
aaggaaatcaaactgcggggtgtttcggtacaggcattgaacgacgcctgctccgcaagt
gacgcgcccatttcatgggagctggatccccgccgcctgaacgctgaggggatggaatcg
ctcaaggccattctcgaaaggcataaaggaaacactgaaatgcagttggctttctgcctt
gacggcaccttctgccgggtacggcttggcccacagtggatggttactcccggcccggcc
ttccagcaggacatgcatcgctggtgttcagctaatcctgtccaataa
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