Bilophila wadsworthia: WCP94_003724
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Entry
WCP94_003724 CDS
T11092
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bws Bilophila wadsworthia
Pathway
bws03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WCP94_003724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bws03400
]
WCP94_003724
DNA repair and recombination proteins [BR:
bws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WCP94_003724
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WCP94_003724
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
AAA_22
UB2H
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
XUR87084
LinkDB
All DBs
Position
complement(2792567..2794648)
Genome browser
AA seq
693 aa
AA seq
DB search
MIPLACGGRDAYLTPMNTTETPLFKLRTEYLPTGDQPAAIEQLASNIEAGVRDQVLLGVT
GSGKTFTVANVIAQVNRPALVLAPNKTLAAQLYNEFRALFPKNAVEYFVSYYDYYQPEAY
VPASDTYIEKDSAINDDIDKLRHAATHALLTRRDVIIVASVSCIYGLGSPEYYARLIIPV
EVGQRVSMDAIITKLVDVQYQRSDMDFHRGTFRVRGDVLEVIPAYEHERALRLEFFGDEI
EAVREIDPLTGEILGNIGKTVIYPASHYVSDRDNLERAMSDVRDELGERLRLFQSQNKLV
EAQRLEQRTQLDLEMMQELGYCTGIENYSRHLDGRKEGDPPATLLDYFPDDFVLFADESH
ISIPQVGGMFKGDRSRKTTLVDFGFRLPSALDNRPLEFHEFLERLNQVVYVSATPGKWEL
ERSQGIVAEQIIRPTGLLDPEVEVRPVKGQIDDLLGECRARVEKHERVLVTTLTKRMAED
LTEYLNAMGVAARYLHSDIDTMERMAIIKALRAGEFDVLVGINLLREGLDIPEVSLVTIL
DADKEGFLRSTGSLIQTFGRAARNAGGKVLLYADTVTASMSAAMGETARRRAKQQDWNET
HGITPTTISKPLATPFDSLYTSSSEGKGKRGRGKQAQQPAAASASADITAQNVARYLKQF
EREMRDAARDLEFEKAAALRDRIKQLREQFLIA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcttgcctgcgggggaagagacgcttatttaacacctatgaatacaaccgaa
actccacttttcaagctgcggaccgaatacctccccacaggcgatcagcctgcggctatc
gagcagctcgcttccaacatcgaagcgggcgtcagggatcaggtcctgcttggtgttact
ggatcggggaagaccttcaccgtggccaacgtcatcgctcaggtcaatcggcccgcgctg
gtgcttgccccgaacaagaccctggcagcacagctttacaatgaattccgcgcgttgttt
ccgaaaaacgccgttgaatatttcgtcagctactacgactattatcagccggaagcctat
gttcccgcgtccgatacgtatattgaaaaggactcggccatcaatgacgatatcgacaag
ctcaggcacgcggctacccatgccctgctgacgcgccgggatgttatcattgtcgcgtcc
gtgtcctgtatctacggccttggctctccggaatactatgcacgtttgatcattccggtc
gaggtcggtcagcgtgtcagcatggacgctatcatcaccaagcttgtggatgttcagtac
caacgcagtgatatggattttcaccggggaacgttccgggttcgcggcgacgtgctggaa
gtgattccggcgtatgagcacgaacgcgccttgcgtctggaatttttcggcgacgaaatt
gaagccgtccgggagatcgacccgctgacaggtgaaatcttggggaatatcgggaaaacc
gttatctatccggcaagccattacgtgtcggacagggataacttggaacgggccatgtcc
gacgttcgggacgagcttggggagcggctgcgcctgttccagtcccagaacaagctggtt
gaggcgcagcgcctggagcagcgcacgcagcttgatttggaaatgatgcaggaattgggc
tactgcaccggcatcgagaactattcccggcatctggatggccgcaaggagggagatcct
ccagccaccttgctcgactattttccggatgactttgtgctgttcgccgacgaatcccat
atcagtattccgcaggtcggcggcatgttcaagggagaccgttcccggaaaacgacgctg
gtggatttcggcttccggcttccgtccgctttggataacaggccgttggaatttcatgaa
tttttggaacggctgaaccaggtagtctatgtttcggcaacgccgggcaaatgggaactg
gagcgttcgcaggggatcgtggcggaacagatcatccgcccgacaggcttgcttgacccc
gaagtcgaggtccgccccgtaaaggggcagatcgatgatctgcttggggaatgccgggcc
cgtgtggaaaagcatgagcgcgtgctggtcacgacgctgaccaagcgcatggccgaggac
ttgaccgaatatctgaatgcgatgggcgtcgcggcccgctatctgcattcggacatcgac
acgatggaacgcatggccatcatcaaagccctgcgggcgggtgagttcgatgtgctggtg
ggcatcaatttgctgcgcgaaggcttggatattcccgaagtttcccttgtcactatcctg
gatgcggataaggaaggttttttgcggtccaccggatcgcttatccagacgttcggacgg
gcggcacgtaatgccggcggaaaggttttgctgtatgcggacacggtgacggcgtccatg
agtgcggctatgggcgaaacggcccgtcggcgcgcgaagcagcaggactggaacgaaacg
cacggtattacgccgacgaccatcagtaagccgcttgccacgccttttgactccctgtac
acctcctcaagtgaaggaaagggaaagcggggacggggcaaacaggctcaacagcctgcg
gcggcttccgcatccgcggacatcacggcccagaacgtggcccggtatttgaagcagttt
gagcgcgagatgcgcgatgccgcccgggatctggaattcgagaaggcggctgccttacgg
gatcgcatcaagcagcttcgggaacagtttttgattgcttag
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